LMF2

 

Full name: lipase maturation factor 2 Alias Symbol: 
Type: protein-coding gene Cytoband: 22q13.33
Entrez ID: 91289 HGNC ID: HGNC:25096 Ensembl Gene: ENSG00000100258 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LMF2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LMF2 91289 31837_at -0.0081 0.9879
GSE20347 LMF2 91289 31837_at -0.0447 0.6403
GSE23400 LMF2 91289 31837_at 0.0443 0.2794
GSE26886 LMF2 91289 31837_at 0.1896 0.2976
GSE29001 LMF2 91289 31837_at -0.0246 0.9226
GSE38129 LMF2 91289 31837_at -0.0001 0.9990
GSE45670 LMF2 91289 31837_at 0.3003 0.0000
GSE53622 LMF2 91289 50224 0.2695 0.0000
GSE53624 LMF2 91289 50224 0.3042 0.0000
GSE63941 LMF2 91289 31837_at 0.0424 0.9096
GSE77861 LMF2 91289 31837_at 0.3034 0.0569
GSE97050 LMF2 91289 A_33_P3367642 0.3294 0.2151
SRP007169 LMF2 91289 RNAseq 0.1332 0.7615
SRP008496 LMF2 91289 RNAseq 0.0003 0.9988
SRP064894 LMF2 91289 RNAseq 1.0288 0.0000
SRP133303 LMF2 91289 RNAseq 0.2814 0.1338
SRP159526 LMF2 91289 RNAseq 0.3353 0.0753
SRP193095 LMF2 91289 RNAseq 0.4535 0.0001
SRP219564 LMF2 91289 RNAseq 0.4796 0.1389
TCGA LMF2 91289 RNAseq 0.1324 0.0100

Upregulated datasets: 1; Downregulated datasets: 0.  

 

Survival by LMF2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of LMF2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LMF2 91289 3 8 19
GSE20123 LMF2 91289 3 8 19
GSE43470 LMF2 91289 2 8 33
GSE46452 LMF2 91289 31 2 26
GSE47630 LMF2 91289 9 4 27
GSE54993 LMF2 91289 4 6 60
GSE54994 LMF2 91289 11 8 34
GSE60625 LMF2 91289 5 0 6
GSE74703 LMF2 91289 2 6 28
GSE74704 LMF2 91289 1 4 15
TCGA LMF2 91289 26 16 54

Total number of gains: 97; Total number of losses: 70; Total Number of normals: 321.  

 

Somatic mutations of LMF2:

 

Generating mutation plots.

 

Highly correlated genes for LMF2:

 

Showing top 20/523 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LMF2SNAPC20.757824303
LMF2LSM120.73762303
LMF2ZNF7470.729143303
LMF2RAB2B0.726385303
LMF2PFDN10.725773303
LMF2PPP6R10.72015303
LMF2GRIN3B0.718494303
LMF2TERF20.716718303
LMF2ZNF8270.710229303
LMF2FRMD80.703116303
LMF2FAM43A0.69477303
LMF2DENND30.694327303
LMF2PARP90.694003303
LMF2YLPM10.691667303
LMF2PUF600.691481303
LMF2AAK10.690517505
LMF2FUS0.690476303
LMF2ALOXE30.688728303
LMF2INTS10.687808404
LMF2C1orf680.686366303

For details and further investigation, click here