| Full name: MAMDC2 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 9q21.12 | ||
| Entrez ID: 100507244 | HGNC ID: HGNC:48719 | Ensembl Gene: ENSG00000204706 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of MAMDC2-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MAMDC2-AS1 | 100507244 | 1559656_a_at | -0.2340 | 0.2536 | |
| GSE26886 | MAMDC2-AS1 | 100507244 | 1559656_a_at | -0.1075 | 0.5885 | |
| GSE45670 | MAMDC2-AS1 | 100507244 | 1559656_a_at | -0.1767 | 0.1373 | |
| GSE53622 | MAMDC2-AS1 | 100507244 | 137250 | -2.0298 | 0.0000 | |
| GSE53624 | MAMDC2-AS1 | 100507244 | 29700 | -1.4622 | 0.0000 | |
| GSE63941 | MAMDC2-AS1 | 100507244 | 1559656_a_at | -0.0925 | 0.5419 | |
| GSE77861 | MAMDC2-AS1 | 100507244 | 1559656_a_at | -0.3582 | 0.0038 | |
| SRP133303 | MAMDC2-AS1 | 100507244 | RNAseq | -0.3672 | 0.2428 | |
| SRP219564 | MAMDC2-AS1 | 100507244 | RNAseq | 0.5742 | 0.3149 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by MAMDC2-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of MAMDC2-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MAMDC2-AS1 | 100507244 | 6 | 10 | 14 | |
| GSE20123 | MAMDC2-AS1 | 100507244 | 6 | 10 | 14 | |
| GSE43470 | MAMDC2-AS1 | 100507244 | 6 | 5 | 32 | |
| GSE46452 | MAMDC2-AS1 | 100507244 | 6 | 14 | 39 | |
| GSE47630 | MAMDC2-AS1 | 100507244 | 1 | 19 | 20 | |
| GSE54993 | MAMDC2-AS1 | 100507244 | 5 | 1 | 64 | |
| GSE54994 | MAMDC2-AS1 | 100507244 | 4 | 13 | 36 | |
| GSE60625 | MAMDC2-AS1 | 100507244 | 0 | 0 | 11 | |
| GSE74703 | MAMDC2-AS1 | 100507244 | 5 | 4 | 27 | |
| GSE74704 | MAMDC2-AS1 | 100507244 | 3 | 7 | 10 |
Total number of gains: 42; Total number of losses: 83; Total Number of normals: 267.
Somatic mutations of MAMDC2-AS1:
Generating mutation plots.
Highly correlated genes for MAMDC2-AS1:
Showing top 20/567 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MAMDC2-AS1 | ACADM | 0.713524 | 5 | 0 | 5 |
| MAMDC2-AS1 | MEIS1 | 0.711854 | 4 | 0 | 4 |
| MAMDC2-AS1 | ARL1 | 0.696237 | 3 | 0 | 3 |
| MAMDC2-AS1 | CAB39L | 0.688838 | 5 | 0 | 5 |
| MAMDC2-AS1 | CA3 | 0.679225 | 5 | 0 | 5 |
| MAMDC2-AS1 | ARHGAP10 | 0.678985 | 5 | 0 | 5 |
| MAMDC2-AS1 | CHP1 | 0.678202 | 4 | 0 | 4 |
| MAMDC2-AS1 | SLMAP | 0.673995 | 4 | 0 | 4 |
| MAMDC2-AS1 | ESPL1 | 0.672963 | 3 | 0 | 3 |
| MAMDC2-AS1 | CARS-AS1 | 0.672616 | 3 | 0 | 3 |
| MAMDC2-AS1 | DMXL1 | 0.665867 | 5 | 0 | 5 |
| MAMDC2-AS1 | MTMR10 | 0.665724 | 4 | 0 | 4 |
| MAMDC2-AS1 | SORT1 | 0.661213 | 4 | 0 | 4 |
| MAMDC2-AS1 | CGNL1 | 0.660073 | 4 | 0 | 4 |
| MAMDC2-AS1 | ACOX3 | 0.659408 | 4 | 0 | 4 |
| MAMDC2-AS1 | RAB5B | 0.659114 | 4 | 0 | 4 |
| MAMDC2-AS1 | DUOX1 | 0.657504 | 3 | 0 | 3 |
| MAMDC2-AS1 | PHACTR4 | 0.655089 | 4 | 0 | 4 |
| MAMDC2-AS1 | HMGN5 | 0.653666 | 3 | 0 | 3 |
| MAMDC2-AS1 | DENND2D | 0.653342 | 3 | 0 | 3 |
For details and further investigation, click here
