NIPAL2

 

Full name: NIPA like domain containing 2 Alias Symbol: FLJ13955
Type: protein-coding gene Cytoband: 8q22.2
Entrez ID: 79815 HGNC ID: HGNC:25854 Ensembl Gene: ENSG00000104361 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of NIPAL2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NIPAL2 79815 227001_at -0.6021 0.3752
GSE20347 NIPAL2 79815 220128_s_at -0.2803 0.0294
GSE23400 NIPAL2 79815 220128_s_at -0.2723 0.0000
GSE26886 NIPAL2 79815 227001_at -1.4075 0.0002
GSE29001 NIPAL2 79815 220128_s_at -0.3563 0.0581
GSE38129 NIPAL2 79815 220128_s_at -0.2733 0.0584
GSE45670 NIPAL2 79815 227001_at -0.6873 0.0108
GSE53622 NIPAL2 79815 7372 -1.2597 0.0000
GSE53624 NIPAL2 79815 7372 -1.3146 0.0000
GSE63941 NIPAL2 79815 227001_at -2.1048 0.1220
GSE77861 NIPAL2 79815 227001_at -1.1753 0.0042
GSE97050 NIPAL2 79815 A_23_P146111 -0.3663 0.2628
SRP007169 NIPAL2 79815 RNAseq -2.0375 0.0005
SRP008496 NIPAL2 79815 RNAseq -1.8395 0.0000
SRP064894 NIPAL2 79815 RNAseq -0.6490 0.0157
SRP133303 NIPAL2 79815 RNAseq -1.1906 0.0000
SRP159526 NIPAL2 79815 RNAseq -1.7184 0.0017
SRP193095 NIPAL2 79815 RNAseq -1.1247 0.0000
SRP219564 NIPAL2 79815 RNAseq -1.0502 0.0998
TCGA NIPAL2 79815 RNAseq -0.1718 0.1215

Upregulated datasets: 0; Downregulated datasets: 9.  


 

Survival by NIPAL2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NIPAL2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NIPAL2 79815 16 0 14
GSE20123 NIPAL2 79815 17 0 13
GSE43470 NIPAL2 79815 21 1 21
GSE46452 NIPAL2 79815 23 0 36
GSE47630 NIPAL2 79815 24 0 16
GSE54993 NIPAL2 79815 0 20 50
GSE54994 NIPAL2 79815 37 1 15
GSE60625 NIPAL2 79815 0 4 7
GSE74703 NIPAL2 79815 18 1 17
GSE74704 NIPAL2 79815 12 0 8
TCGA NIPAL2 79815 56 1 39

Total number of gains: 224; Total number of losses: 28; Total Number of normals: 236.  


 

Somatic mutations of NIPAL2:

 

Generating mutation plots.

 

Highly correlated genes for NIPAL2:

 

Showing top 20/1182 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NIPAL2NCCRP10.756934303
NIPAL2STXBP50.756146606
NIPAL2TMPRSS11A0.746339303
NIPAL2PGLYRP30.740201303
NIPAL2CXCL170.738366707
NIPAL2ZDHHC200.730239404
NIPAL2FAM219B0.729114303
NIPAL2UPK3B0.721524303
NIPAL2FAM3D0.717833707
NIPAL2CAPN140.716636606
NIPAL2C6orf1320.71544707
NIPAL2EPB41L4A0.715001908
NIPAL2ELF30.709431909
NIPAL2SPRR2F0.706185303
NIPAL2OTOP30.705611303
NIPAL2KRT780.703589707
NIPAL2SPAG170.703562505
NIPAL2EPS8L20.7013411011
NIPAL2ST6GALNAC10.700887706
NIPAL2C15orf480.700701606

For details and further investigation, click here