NTM

 

Full name: neurotrimin Alias Symbol: HNT|NTRI|IGLON2|CEPU-1
Type: protein-coding gene Cytoband: 11q25
Entrez ID: 50863 HGNC ID: HGNC:17941 Ensembl Gene: ENSG00000182667 OMIM ID: 607938
Drug and gene relationship at DGIdb

 

Expression of NTM:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE26886 NTM 50863 241934_at 0.0214 0.8850
GSE53622 NTM 50863 106132 0.6067 0.0000
GSE53624 NTM 50863 106132 1.0473 0.0000
GSE63941 NTM 50863 241934_at -0.0083 0.9659
GSE97050 NTM 50863 A_33_P3296333 -0.2600 0.2848
SRP007169 NTM 50863 RNAseq 3.0646 0.0004
SRP008496 NTM 50863 RNAseq 4.0879 0.0000
SRP064894 NTM 50863 RNAseq 0.8783 0.0003
SRP133303 NTM 50863 RNAseq 1.3754 0.0002
SRP159526 NTM 50863 RNAseq 1.3789 0.0000
SRP219564 NTM 50863 RNAseq -0.0977 0.8992
TCGA NTM 50863 RNAseq 0.4380 0.0370

Upregulated datasets: 5; Downregulated datasets: 0.  


 

Survival by NTM expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NTM:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NTM 50863 0 14 16
GSE20123 NTM 50863 0 14 16
GSE43470 NTM 50863 2 7 34
GSE46452 NTM 50863 3 26 30
GSE47630 NTM 50863 2 19 19
GSE54993 NTM 50863 10 0 60
GSE54994 NTM 50863 4 20 29
GSE60625 NTM 50863 0 3 8
GSE74703 NTM 50863 1 5 30
GSE74704 NTM 50863 0 10 10
TCGA NTM 50863 5 51 40

Total number of gains: 27; Total number of losses: 169; Total Number of normals: 292.  


 

Somatic mutations of NTM:

 

Generating mutation plots.

 

Highly correlated genes for NTM:

 

Showing top 20/38 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NTMISLR0.739411303
NTMAEBP10.721001303
NTMANTXR10.717277303
NTMMXRA80.681154303
NTMCOL8A10.676912303
NTMCOL6A10.663058303
NTMPDGFRL0.65712303
NTMITGA110.645552403
NTMMICAL20.644293303
NTMFSTL10.640994303
NTMCOL11A10.640185303
NTMPLA2G12B0.639719303
NTMRARRES20.638455404
NTMSGIP10.626093303
NTMLUM0.625083303
NTMCOL3A10.624743303
NTMCOL12A10.622939303
NTMCOL6A20.621153303
NTMSFRP40.620418303
NTMKCND20.606493303

For details and further investigation, click here