SFRP4

 

Full name: secreted frizzled related protein 4 Alias Symbol: frpHE|FRP-4|FRPHE|FRZB-2
Type: protein-coding gene Cytoband: 7p14.1
Entrez ID: 6424 HGNC ID: HGNC:10778 Ensembl Gene: ENSG00000106483 OMIM ID: 606570
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

SFRP4 involved pathways:

KEGG pathway Description View
hsa04310Wnt signaling pathway

 

Expression of SFRP4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SFRP4 6424 204051_s_at 1.7679 0.2333
GSE20347 SFRP4 6424 204051_s_at 1.4156 0.0000
GSE23400 SFRP4 6424 204051_s_at 1.2194 0.0000
GSE26886 SFRP4 6424 204051_s_at 1.0509 0.0022
GSE29001 SFRP4 6424 204051_s_at 0.6211 0.0062
GSE38129 SFRP4 6424 204051_s_at 1.8504 0.0002
GSE45670 SFRP4 6424 204051_s_at -1.0339 0.0186
GSE53622 SFRP4 6424 14294 3.0289 0.0000
GSE53624 SFRP4 6424 14294 2.8416 0.0000
GSE63941 SFRP4 6424 204051_s_at -1.9921 0.0005
GSE77861 SFRP4 6424 204051_s_at 0.0626 0.4875
GSE97050 SFRP4 A_21_P0011967 0.7889 0.2615
SRP007169 SFRP4 6424 RNAseq 9.6358 0.0000
SRP008496 SFRP4 6424 RNAseq 9.4696 0.0000
SRP064894 SFRP4 6424 RNAseq 4.3985 0.0000
SRP133303 SFRP4 6424 RNAseq 4.3395 0.0000
SRP159526 SFRP4 6424 RNAseq 4.3867 0.0000
TCGA SFRP4 6424 RNAseq 0.6914 0.0433

Upregulated datasets: 11; Downregulated datasets: 2.  


 

Survival by SFRP4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SFRP4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SFRP4 6424 15 0 15
GSE20123 SFRP4 6424 14 0 16
GSE43470 SFRP4 6424 4 0 39
GSE46452 SFRP4 6424 11 1 47
GSE47630 SFRP4 6424 8 1 31
GSE54993 SFRP4 6424 0 7 63
GSE54994 SFRP4 6424 18 3 32
GSE60625 SFRP4 6424 0 0 11
GSE74703 SFRP4 6424 4 0 32
GSE74704 SFRP4 6424 8 0 12
TCGA SFRP4 6424 52 7 37

Total number of gains: 134; Total number of losses: 19; Total Number of normals: 335.  


 

Somatic mutations of SFRP4:

 

Generating mutation plots.

 

Highly correlated genes for SFRP4:

 

Showing top 20/595 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SFRP4ITGA110.756628404
SFRP4ASPN0.74561411010
SFRP4MRPS60.707324303
SFRP4ISLR0.68179713011
SFRP4COL8A10.680779909
SFRP4FNDC10.679904807
SFRP4SULF10.66395612011
SFRP4CELSR30.659562403
SFRP4ADAMTS160.657863303
SFRP4GALNT150.657758403
SFRP4SLC39A10.655434404
SFRP4AEBP10.65360512011
SFRP4LOXL10.65036713011
SFRP4MMP110.649599909
SFRP4PLXNC10.649269908
SFRP4VCAN0.64909413012
SFRP4XPO50.647173303
SFRP4DACT10.6460613011
SFRP4PTGFRN0.645121403
SFRP4RARRES20.6415213013

For details and further investigation, click here