| Full name: polycomb group ring finger 5 | Alias Symbol: MGC16202 | ||
| Type: protein-coding gene | Cytoband: 10q23.32 | ||
| Entrez ID: 84333 | HGNC ID: HGNC:28264 | Ensembl Gene: ENSG00000180628 | OMIM ID: 617407 |
| Drug and gene relationship at DGIdb | |||
Expression of PCGF5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PCGF5 | 84333 | 229194_at | -0.2195 | 0.8046 | |
| GSE26886 | PCGF5 | 84333 | 226326_at | -0.8380 | 0.0504 | |
| GSE45670 | PCGF5 | 84333 | 226326_at | -0.8794 | 0.0002 | |
| GSE53622 | PCGF5 | 84333 | 113691 | -0.6551 | 0.0000 | |
| GSE53624 | PCGF5 | 84333 | 113691 | -0.6248 | 0.0000 | |
| GSE63941 | PCGF5 | 84333 | 229194_at | -0.3816 | 0.4825 | |
| GSE77861 | PCGF5 | 84333 | 227935_s_at | -0.1376 | 0.6827 | |
| GSE97050 | PCGF5 | 84333 | A_23_P202117 | 0.6556 | 0.1453 | |
| SRP007169 | PCGF5 | 84333 | RNAseq | -0.1395 | 0.6577 | |
| SRP008496 | PCGF5 | 84333 | RNAseq | -0.1848 | 0.4676 | |
| SRP064894 | PCGF5 | 84333 | RNAseq | -0.2367 | 0.1144 | |
| SRP133303 | PCGF5 | 84333 | RNAseq | 0.2552 | 0.1154 | |
| SRP159526 | PCGF5 | 84333 | RNAseq | 0.5145 | 0.2616 | |
| SRP193095 | PCGF5 | 84333 | RNAseq | -0.2526 | 0.0870 | |
| SRP219564 | PCGF5 | 84333 | RNAseq | 0.6002 | 0.1890 | |
| TCGA | PCGF5 | 84333 | RNAseq | -0.2618 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PCGF5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PCGF5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PCGF5 | 84333 | 1 | 7 | 22 | |
| GSE20123 | PCGF5 | 84333 | 1 | 6 | 23 | |
| GSE43470 | PCGF5 | 84333 | 0 | 8 | 35 | |
| GSE46452 | PCGF5 | 84333 | 0 | 11 | 48 | |
| GSE47630 | PCGF5 | 84333 | 2 | 14 | 24 | |
| GSE54993 | PCGF5 | 84333 | 7 | 0 | 63 | |
| GSE54994 | PCGF5 | 84333 | 1 | 11 | 41 | |
| GSE60625 | PCGF5 | 84333 | 0 | 0 | 11 | |
| GSE74703 | PCGF5 | 84333 | 0 | 6 | 30 | |
| GSE74704 | PCGF5 | 84333 | 0 | 4 | 16 | |
| TCGA | PCGF5 | 84333 | 7 | 27 | 62 |
Total number of gains: 19; Total number of losses: 94; Total Number of normals: 375.
Somatic mutations of PCGF5:
Generating mutation plots.
Highly correlated genes for PCGF5:
Showing top 20/684 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PCGF5 | DOCK10 | 0.757523 | 3 | 0 | 3 |
| PCGF5 | PLAA | 0.750785 | 3 | 0 | 3 |
| PCGF5 | SPCS2 | 0.707289 | 3 | 0 | 3 |
| PCGF5 | AIDA | 0.704885 | 3 | 0 | 3 |
| PCGF5 | GIMAP5 | 0.701937 | 3 | 0 | 3 |
| PCGF5 | CBX7 | 0.700771 | 5 | 0 | 5 |
| PCGF5 | HNRNPA1 | 0.698664 | 3 | 0 | 3 |
| PCGF5 | ING3 | 0.698187 | 4 | 0 | 4 |
| PCGF5 | N4BP2L1 | 0.69749 | 6 | 0 | 6 |
| PCGF5 | PLEKHF2 | 0.697 | 3 | 0 | 3 |
| PCGF5 | ZNF564 | 0.694035 | 3 | 0 | 3 |
| PCGF5 | POLK | 0.691961 | 4 | 0 | 3 |
| PCGF5 | FLT3LG | 0.689605 | 3 | 0 | 3 |
| PCGF5 | KLHDC1 | 0.686594 | 5 | 0 | 5 |
| PCGF5 | MKX | 0.686491 | 3 | 0 | 3 |
| PCGF5 | CD69 | 0.685697 | 6 | 0 | 6 |
| PCGF5 | ATP8A1 | 0.681268 | 5 | 0 | 5 |
| PCGF5 | SFXN2 | 0.680141 | 3 | 0 | 3 |
| PCGF5 | TNFSF12 | 0.674291 | 3 | 0 | 3 |
| PCGF5 | PLCL1 | 0.673296 | 5 | 0 | 4 |
For details and further investigation, click here
