| Full name: piggyBac transposable element derived 5 | Alias Symbol: DKFZp761A0620|FLJ11413 | ||
| Type: protein-coding gene | Cytoband: 1q42.13 | ||
| Entrez ID: 79605 | HGNC ID: HGNC:19405 | Ensembl Gene: ENSG00000177614 | OMIM ID: 616791 |
| Drug and gene relationship at DGIdb | |||
Expression of PGBD5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PGBD5 | 79605 | 219225_at | 2.0106 | 0.0306 | |
| GSE20347 | PGBD5 | 79605 | 219225_at | 1.0352 | 0.0067 | |
| GSE23400 | PGBD5 | 79605 | 219225_at | 0.4689 | 0.0001 | |
| GSE26886 | PGBD5 | 79605 | 219225_at | 1.2449 | 0.0111 | |
| GSE29001 | PGBD5 | 79605 | 219225_at | 1.1371 | 0.0288 | |
| GSE38129 | PGBD5 | 79605 | 219225_at | 1.4895 | 0.0000 | |
| GSE45670 | PGBD5 | 79605 | 219225_at | 2.3224 | 0.0000 | |
| GSE53622 | PGBD5 | 79605 | 13769 | 1.5450 | 0.0000 | |
| GSE53624 | PGBD5 | 79605 | 13769 | 1.6975 | 0.0000 | |
| GSE63941 | PGBD5 | 79605 | 219225_at | -1.7995 | 0.0057 | |
| GSE77861 | PGBD5 | 79605 | 219225_at | 1.7211 | 0.0638 | |
| GSE97050 | PGBD5 | 79605 | A_23_P126649 | 0.6438 | 0.1279 | |
| SRP007169 | PGBD5 | 79605 | RNAseq | 2.8038 | 0.0027 | |
| SRP008496 | PGBD5 | 79605 | RNAseq | 1.0853 | 0.2365 | |
| SRP064894 | PGBD5 | 79605 | RNAseq | 1.6970 | 0.0000 | |
| SRP133303 | PGBD5 | 79605 | RNAseq | 0.5807 | 0.0234 | |
| SRP159526 | PGBD5 | 79605 | RNAseq | 2.3954 | 0.0007 | |
| SRP193095 | PGBD5 | 79605 | RNAseq | 1.3476 | 0.0000 | |
| SRP219564 | PGBD5 | 79605 | RNAseq | 2.4084 | 0.0326 | |
| TCGA | PGBD5 | 79605 | RNAseq | 0.9031 | 0.0000 |
Upregulated datasets: 13; Downregulated datasets: 1.
Survival by PGBD5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PGBD5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PGBD5 | 79605 | 11 | 0 | 19 | |
| GSE20123 | PGBD5 | 79605 | 11 | 0 | 19 | |
| GSE43470 | PGBD5 | 79605 | 8 | 1 | 34 | |
| GSE46452 | PGBD5 | 79605 | 4 | 2 | 53 | |
| GSE47630 | PGBD5 | 79605 | 15 | 0 | 25 | |
| GSE54993 | PGBD5 | 79605 | 0 | 6 | 64 | |
| GSE54994 | PGBD5 | 79605 | 17 | 0 | 36 | |
| GSE60625 | PGBD5 | 79605 | 0 | 0 | 11 | |
| GSE74703 | PGBD5 | 79605 | 8 | 1 | 27 | |
| GSE74704 | PGBD5 | 79605 | 5 | 0 | 15 | |
| TCGA | PGBD5 | 79605 | 44 | 4 | 48 |
Total number of gains: 123; Total number of losses: 14; Total Number of normals: 351.
Somatic mutations of PGBD5:
Generating mutation plots.
Highly correlated genes for PGBD5:
Showing top 20/832 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PGBD5 | VANGL2 | 0.708284 | 5 | 0 | 4 |
| PGBD5 | CAPN12 | 0.702097 | 3 | 0 | 3 |
| PGBD5 | DLX5 | 0.683602 | 11 | 0 | 10 |
| PGBD5 | CDCA2 | 0.678332 | 4 | 0 | 4 |
| PGBD5 | GPRIN1 | 0.670352 | 4 | 0 | 3 |
| PGBD5 | SPNS1 | 0.668081 | 3 | 0 | 3 |
| PGBD5 | ACVR1C | 0.666676 | 3 | 0 | 3 |
| PGBD5 | DNAH14 | 0.657428 | 6 | 0 | 5 |
| PGBD5 | CABLES2 | 0.656409 | 5 | 0 | 4 |
| PGBD5 | XPR1 | 0.655452 | 7 | 0 | 7 |
| PGBD5 | CCNK | 0.655451 | 4 | 0 | 4 |
| PGBD5 | CASC15 | 0.652656 | 4 | 0 | 3 |
| PGBD5 | WDR66 | 0.651519 | 7 | 0 | 6 |
| PGBD5 | TMTC1 | 0.650941 | 3 | 0 | 3 |
| PGBD5 | ARTN | 0.649133 | 8 | 0 | 6 |
| PGBD5 | ZCCHC3 | 0.649005 | 4 | 0 | 4 |
| PGBD5 | CENPA | 0.649004 | 6 | 0 | 5 |
| PGBD5 | GXYLT2 | 0.648127 | 3 | 0 | 3 |
| PGBD5 | TMEM17 | 0.64317 | 3 | 0 | 3 |
| PGBD5 | LIN9 | 0.639514 | 7 | 0 | 5 |
For details and further investigation, click here
