CCNK

 

Full name: cyclin K Alias Symbol: CPR4
Type: protein-coding gene Cytoband: 14q32.2
Entrez ID: 8812 HGNC ID: HGNC:1596 Ensembl Gene: ENSG00000090061 OMIM ID: 603544
Drug and gene relationship at DGIdb

 

Expression of CCNK:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCNK 8812 225824_at 0.5691 0.0493
GSE20347 CCNK 8812 219273_at 0.0317 0.6935
GSE23400 CCNK 8812 219273_at -0.1165 0.0040
GSE26886 CCNK 8812 225824_at 0.3029 0.1978
GSE29001 CCNK 8812 219273_at -0.0191 0.9260
GSE38129 CCNK 8812 219273_at 0.0157 0.8453
GSE45670 CCNK 8812 225824_at 0.4365 0.0025
GSE53622 CCNK 8812 2915 0.6115 0.0000
GSE53624 CCNK 8812 2915 0.4768 0.0000
GSE63941 CCNK 8812 225824_at 0.1523 0.6417
GSE77861 CCNK 8812 225824_at 0.2139 0.5527
GSE97050 CCNK 8812 A_24_P348925 0.7381 0.1296
SRP007169 CCNK 8812 RNAseq 0.6424 0.1259
SRP008496 CCNK 8812 RNAseq 0.7325 0.0190
SRP064894 CCNK 8812 RNAseq 0.2662 0.0960
SRP133303 CCNK 8812 RNAseq 0.5820 0.0000
SRP159526 CCNK 8812 RNAseq 0.2257 0.5163
SRP193095 CCNK 8812 RNAseq 0.1509 0.1950
SRP219564 CCNK 8812 RNAseq 0.6246 0.1339
TCGA CCNK 8812 RNAseq 0.1418 0.0033

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCNK expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCNK:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCNK 8812 10 5 15
GSE20123 CCNK 8812 10 4 16
GSE43470 CCNK 8812 7 4 32
GSE46452 CCNK 8812 17 3 39
GSE47630 CCNK 8812 11 8 21
GSE54993 CCNK 8812 3 8 59
GSE54994 CCNK 8812 21 4 28
GSE60625 CCNK 8812 0 2 9
GSE74703 CCNK 8812 6 3 27
GSE74704 CCNK 8812 6 3 11
TCGA CCNK 8812 31 19 46

Total number of gains: 122; Total number of losses: 63; Total Number of normals: 303.  


 

Somatic mutations of CCNK:

 

Generating mutation plots.

 

Highly correlated genes for CCNK:

 

Showing top 20/742 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCNKYWHAG0.790788404
CCNKCDCA20.77867303
CCNKBRD90.760667303
CCNKKDM1B0.749257303
CCNKSPI10.748427303
CCNKDMAP10.742502303
CCNKPSEN10.740974404
CCNKPOLR3D0.740718303
CCNKSARDH0.735863303
CCNKIFNGR20.734657303
CCNKIFNAR20.733231303
CCNKCOCH0.729583303
CCNKSSH10.726003303
CCNKEMG10.721222303
CCNKTEAD40.719979404
CCNKSTIP10.712262404
CCNKTSEN150.710267303
CCNKRTKN0.70878404
CCNKZC3H180.706119303
CCNKNAV10.701445303

For details and further investigation, click here