PITPNM1

 

Full name: phosphatidylinositol transfer protein membrane associated 1 Alias Symbol: DRES9|NIR2|RDGB1|RDGBA1|Rd9|RDGB
Type: protein-coding gene Cytoband: 11q13.2
Entrez ID: 9600 HGNC ID: HGNC:9003 Ensembl Gene: ENSG00000110697 OMIM ID: 608794
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of PITPNM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PITPNM1 9600 203826_s_at 0.4615 0.1831
GSE20347 PITPNM1 9600 203826_s_at 0.1560 0.3094
GSE23400 PITPNM1 9600 203826_s_at -0.1170 0.0837
GSE26886 PITPNM1 9600 203826_s_at -0.0096 0.9669
GSE29001 PITPNM1 9600 203826_s_at -0.3275 0.1088
GSE38129 PITPNM1 9600 203826_s_at 0.1488 0.2435
GSE45670 PITPNM1 9600 203826_s_at 0.2227 0.0400
GSE53622 PITPNM1 9600 124144 0.1711 0.0994
GSE53624 PITPNM1 9600 124144 0.1316 0.0749
GSE63941 PITPNM1 9600 203826_s_at 0.9951 0.0551
GSE77861 PITPNM1 9600 203826_s_at 0.1600 0.5008
GSE97050 PITPNM1 9600 A_23_P1519 0.5026 0.1745
SRP007169 PITPNM1 9600 RNAseq -1.5578 0.0003
SRP008496 PITPNM1 9600 RNAseq -1.5678 0.0000
SRP064894 PITPNM1 9600 RNAseq -0.4241 0.0396
SRP133303 PITPNM1 9600 RNAseq 0.2021 0.4765
SRP159526 PITPNM1 9600 RNAseq -0.6273 0.0129
SRP193095 PITPNM1 9600 RNAseq 0.1672 0.2563
SRP219564 PITPNM1 9600 RNAseq -0.3764 0.3988
TCGA PITPNM1 9600 RNAseq 0.1003 0.1237

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by PITPNM1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PITPNM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PITPNM1 9600 10 3 17
GSE20123 PITPNM1 9600 10 3 17
GSE43470 PITPNM1 9600 5 2 36
GSE46452 PITPNM1 9600 14 3 42
GSE47630 PITPNM1 9600 8 5 27
GSE54993 PITPNM1 9600 3 1 66
GSE54994 PITPNM1 9600 13 4 36
GSE60625 PITPNM1 9600 0 3 8
GSE74703 PITPNM1 9600 4 1 31
GSE74704 PITPNM1 9600 8 1 11
TCGA PITPNM1 9600 30 8 58

Total number of gains: 105; Total number of losses: 34; Total Number of normals: 349.  


 

Somatic mutations of PITPNM1:

 

Generating mutation plots.

 

Highly correlated genes for PITPNM1:

 

Showing top 20/166 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PITPNM1HYAL20.658659303
PITPNM1C4orf480.638311303
PITPNM1HOXD-AS20.625271303
PITPNM1IGSF80.621315303
PITPNM1RHOF0.618182403
PITPNM1CHPF20.617373503
PITPNM1UBXN110.613181303
PITPNM1OTX10.612274303
PITPNM1KCNQ10.612264403
PITPNM1CDK2AP20.6115461008
PITPNM1S100A7A0.605327303
PITPNM1CCDC700.604688303
PITPNM1PTK2B0.602272303
PITPNM1UBR40.597277303
PITPNM1PLCB30.594633906
PITPNM1IFRD20.594139303
PITPNM1SIPA1L30.587718403
PITPNM1SH2D2A0.587391403
PITPNM1SPHK10.585744504
PITPNM1COL1A10.584575303

For details and further investigation, click here