| Full name: polycystin 2 like 2, transient receptor potential cation channel | Alias Symbol: TRPP5 | ||
| Type: protein-coding gene | Cytoband: 5q31.2 | ||
| Entrez ID: 27039 | HGNC ID: HGNC:9012 | Ensembl Gene: ENSG00000078795 | OMIM ID: 604669 |
Expression of PKD2L2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PKD2L2 | 27039 | 221118_at | -0.1465 | 0.5327 | |
| GSE20347 | PKD2L2 | 27039 | 221118_at | 0.0269 | 0.7033 | |
| GSE23400 | PKD2L2 | 27039 | 221118_at | -0.0189 | 0.2754 | |
| GSE26886 | PKD2L2 | 27039 | 221118_at | -0.1436 | 0.2369 | |
| GSE29001 | PKD2L2 | 27039 | 221118_at | -0.0900 | 0.4508 | |
| GSE38129 | PKD2L2 | 27039 | 221118_at | 0.0368 | 0.5803 | |
| GSE45670 | PKD2L2 | 27039 | 221118_at | 0.1882 | 0.0337 | |
| GSE53622 | PKD2L2 | 27039 | 39796 | -0.1857 | 0.0399 | |
| GSE53624 | PKD2L2 | 27039 | 39796 | -0.3451 | 0.0005 | |
| GSE63941 | PKD2L2 | 27039 | 221118_at | 0.1648 | 0.4198 | |
| GSE77861 | PKD2L2 | 27039 | 221118_at | -0.0352 | 0.7730 | |
| GSE97050 | PKD2L2 | 27039 | A_33_P3247325 | -0.0852 | 0.6448 | |
| SRP133303 | PKD2L2 | 27039 | RNAseq | 0.1473 | 0.5325 | |
| SRP193095 | PKD2L2 | 27039 | RNAseq | 0.0193 | 0.8992 | |
| TCGA | PKD2L2 | 27039 | RNAseq | -0.3097 | 0.5032 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by PKD2L2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PKD2L2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PKD2L2 | 27039 | 3 | 10 | 17 | |
| GSE20123 | PKD2L2 | 27039 | 4 | 10 | 16 | |
| GSE43470 | PKD2L2 | 27039 | 4 | 7 | 32 | |
| GSE46452 | PKD2L2 | 27039 | 0 | 27 | 32 | |
| GSE47630 | PKD2L2 | 27039 | 0 | 21 | 19 | |
| GSE54993 | PKD2L2 | 27039 | 9 | 1 | 60 | |
| GSE54994 | PKD2L2 | 27039 | 3 | 13 | 37 | |
| GSE60625 | PKD2L2 | 27039 | 0 | 0 | 11 | |
| GSE74703 | PKD2L2 | 27039 | 3 | 5 | 28 | |
| GSE74704 | PKD2L2 | 27039 | 3 | 4 | 13 | |
| TCGA | PKD2L2 | 27039 | 4 | 36 | 56 |
Total number of gains: 33; Total number of losses: 134; Total Number of normals: 321.
Somatic mutations of PKD2L2:
Generating mutation plots.
Highly correlated genes for PKD2L2:
Showing top 20/165 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PKD2L2 | GML | 0.716106 | 3 | 0 | 3 |
| PKD2L2 | PZP | 0.677205 | 3 | 0 | 3 |
| PKD2L2 | CLC | 0.676047 | 4 | 0 | 3 |
| PKD2L2 | CIITA | 0.648859 | 4 | 0 | 4 |
| PKD2L2 | KCND3 | 0.647106 | 4 | 0 | 3 |
| PKD2L2 | PRKAR2A | 0.644214 | 4 | 0 | 4 |
| PKD2L2 | CHD2 | 0.643238 | 4 | 0 | 4 |
| PKD2L2 | SRSF11 | 0.633724 | 3 | 0 | 3 |
| PKD2L2 | SOAT2 | 0.631997 | 3 | 0 | 3 |
| PKD2L2 | IFNA7 | 0.628614 | 4 | 0 | 4 |
| PKD2L2 | KDM6B | 0.622736 | 4 | 0 | 4 |
| PKD2L2 | CGA | 0.622122 | 4 | 0 | 4 |
| PKD2L2 | FRMPD4 | 0.622001 | 5 | 0 | 4 |
| PKD2L2 | PTH | 0.620983 | 3 | 0 | 3 |
| PKD2L2 | LINC00474 | 0.618994 | 4 | 0 | 3 |
| PKD2L2 | CNTF | 0.616586 | 3 | 0 | 3 |
| PKD2L2 | SERPINA5 | 0.604566 | 5 | 0 | 4 |
| PKD2L2 | GDF2 | 0.603446 | 4 | 0 | 3 |
| PKD2L2 | CCDC30 | 0.602184 | 6 | 0 | 4 |
| PKD2L2 | CA7 | 0.600628 | 4 | 0 | 3 |
For details and further investigation, click here
