PLA2G6

 

Full name: phospholipase A2 group VI Alias Symbol: iPLA2|PNPLA9|PARK14|iPLA2beta|NBIA2
Type: protein-coding gene Cytoband: 22q13.1
Entrez ID: 8398 HGNC ID: HGNC:9039 Ensembl Gene: ENSG00000184381 OMIM ID: 603604
Drug and gene relationship at DGIdb

 

PLA2G6 involved pathways:

KEGG pathway Description View
hsa04014Ras signaling pathway
hsa04270Vascular smooth muscle contraction
hsa04666Fc gamma R-mediated phagocytosis
hsa04750Inflammatory mediator regulation of TRP channels

 

Expression of PLA2G6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PLA2G6 8398 204691_x_at -0.0441 0.8816
GSE20347 PLA2G6 8398 210647_x_at -0.0500 0.7142
GSE23400 PLA2G6 8398 204691_x_at -0.2162 0.0000
GSE26886 PLA2G6 8398 204691_x_at -0.0975 0.4291
GSE29001 PLA2G6 8398 210647_x_at -0.2734 0.1753
GSE38129 PLA2G6 8398 204691_x_at -0.0888 0.3628
GSE45670 PLA2G6 8398 204691_x_at -0.0070 0.9453
GSE53622 PLA2G6 8398 32914 0.2631 0.0320
GSE53624 PLA2G6 8398 32914 -0.0287 0.7685
GSE63941 PLA2G6 8398 204691_x_at 0.6089 0.0073
GSE77861 PLA2G6 8398 210647_x_at 0.0419 0.7644
GSE97050 PLA2G6 8398 A_23_P6464 0.2029 0.4659
SRP007169 PLA2G6 8398 RNAseq 0.7660 0.1971
SRP008496 PLA2G6 8398 RNAseq 0.3703 0.4657
SRP064894 PLA2G6 8398 RNAseq 0.1638 0.3375
SRP133303 PLA2G6 8398 RNAseq -0.5641 0.0028
SRP159526 PLA2G6 8398 RNAseq 0.5472 0.2359
SRP193095 PLA2G6 8398 RNAseq 0.1515 0.4593
SRP219564 PLA2G6 8398 RNAseq 0.0371 0.9085
TCGA PLA2G6 8398 RNAseq -0.1063 0.1748

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PLA2G6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PLA2G6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PLA2G6 8398 6 5 19
GSE20123 PLA2G6 8398 6 4 20
GSE43470 PLA2G6 8398 5 5 33
GSE46452 PLA2G6 8398 32 2 25
GSE47630 PLA2G6 8398 9 4 27
GSE54993 PLA2G6 8398 3 6 61
GSE54994 PLA2G6 8398 9 7 37
GSE60625 PLA2G6 8398 5 0 6
GSE74703 PLA2G6 8398 5 4 27
GSE74704 PLA2G6 8398 3 2 15
TCGA PLA2G6 8398 27 15 54

Total number of gains: 110; Total number of losses: 54; Total Number of normals: 324.  


 

Somatic mutations of PLA2G6:

 

Generating mutation plots.

 

Highly correlated genes for PLA2G6:

 

Showing top 20/549 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PLA2G6ASCL30.730438404
PLA2G6RGR0.712091505
PLA2G6ADAP10.700347303
PLA2G6MAGEB20.699651303
PLA2G6GTF2IRD20.673469303
PLA2G6MVK0.673019606
PLA2G6FGF210.67074303
PLA2G6CYP2D60.667021606
PLA2G6CNR20.66679505
PLA2G6HRC0.666059505
PLA2G6UBXN110.665855404
PLA2G6RGSL10.664559403
PLA2G6FGF230.663619404
PLA2G6AMHR20.65687606
PLA2G6MC2R0.65343303
PLA2G6GLP1R0.653143505
PLA2G6UBA10.652329404
PLA2G6ABHD110.65087303
PLA2G6RFPL30.650107403
PLA2G6SMR3B0.650048303

For details and further investigation, click here