PPP3CA

 

Full name: protein phosphatase 3 catalytic subunit alpha Alias Symbol: CNA1|PPP2B
Type: protein-coding gene Cytoband: 4q24
Entrez ID: 5530 HGNC ID: HGNC:9314 Ensembl Gene: ENSG00000138814 OMIM ID: 114105
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

PPP3CA involved pathways:

KEGG pathway Description View
hsa04010MAPK signaling pathway
hsa04020Calcium signaling pathway
hsa04022cGMP-PKG signaling pathway
hsa04114Oocyte meiosis
hsa04310Wnt signaling pathway
hsa04360Axon guidance
hsa04370VEGF signaling pathway
hsa04380Osteoclast differentiation
hsa04650Natural killer cell mediated cytotoxicity
hsa04660T cell receptor signaling pathway
hsa04662B cell receptor signaling pathway
hsa04720Long-term potentiation
hsa04724Glutamatergic synapse
hsa04728Dopaminergic synapse
hsa04921Oxytocin signaling pathway
hsa04922Glucagon signaling pathway
hsa04924Renin secretion
hsa05010Alzheimer's disease
hsa05014Amyotrophic lateral sclerosis (ALS)
hsa05031Amphetamine addiction
hsa05152Tuberculosis
hsa05166HTLV-I infection

 

Expression of PPP3CA:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PPP3CA 5530 202429_s_at 0.1435 0.7134
GSE20347 PPP3CA 5530 202425_x_at 0.0758 0.5654
GSE23400 PPP3CA 5530 202425_x_at 0.2596 0.0000
GSE26886 PPP3CA 5530 202425_x_at 0.3209 0.2453
GSE29001 PPP3CA 5530 202425_x_at 0.3365 0.1616
GSE38129 PPP3CA 5530 202425_x_at 0.0137 0.9205
GSE45670 PPP3CA 5530 202429_s_at -0.2083 0.3086
GSE53622 PPP3CA 5530 43299 0.1015 0.0926
GSE53624 PPP3CA 5530 43299 -0.0246 0.7753
GSE63941 PPP3CA 5530 202457_s_at -0.1966 0.6023
GSE77861 PPP3CA 5530 202457_s_at 0.4949 0.1789
GSE97050 PPP3CA 5530 A_24_P414371 0.4555 0.2187
SRP007169 PPP3CA 5530 RNAseq 1.1057 0.0054
SRP008496 PPP3CA 5530 RNAseq 1.0035 0.0001
SRP064894 PPP3CA 5530 RNAseq 0.3982 0.0609
SRP133303 PPP3CA 5530 RNAseq 0.4346 0.0339
SRP159526 PPP3CA 5530 RNAseq 0.3900 0.1681
SRP193095 PPP3CA 5530 RNAseq 0.3808 0.0178
SRP219564 PPP3CA 5530 RNAseq 0.2610 0.4515
TCGA PPP3CA 5530 RNAseq -0.1163 0.0185

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by PPP3CA expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PPP3CA:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PPP3CA 5530 1 12 17
GSE20123 PPP3CA 5530 1 12 17
GSE43470 PPP3CA 5530 0 13 30
GSE46452 PPP3CA 5530 1 36 22
GSE47630 PPP3CA 5530 0 20 20
GSE54993 PPP3CA 5530 9 0 61
GSE54994 PPP3CA 5530 1 11 41
GSE60625 PPP3CA 5530 0 3 8
GSE74703 PPP3CA 5530 0 11 25
GSE74704 PPP3CA 5530 0 6 14
TCGA PPP3CA 5530 8 40 48

Total number of gains: 21; Total number of losses: 164; Total Number of normals: 303.  


 

Somatic mutations of PPP3CA:

 

Generating mutation plots.

 

Highly correlated genes for PPP3CA:

 

Showing top 20/152 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PPP3CAHK20.729315303
PPP3CARCC20.728525303
PPP3CAPPP1R14C0.718707303
PPP3CAIRX20.718601303
PPP3CAANKLE20.714316404
PPP3CAGTF3C40.702283303
PPP3CACDC450.701599303
PPP3CAGTSE10.687604403
PPP3CAAP1S30.683047303
PPP3CAPRKDC0.673142303
PPP3CACLCN50.653493303
PPP3CAENTPD70.652511303
PPP3CAMIS18BP10.651191404
PPP3CAUHRF10.64769404
PPP3CAPRPF40.629273403
PPP3CACASP20.621841303
PPP3CANLN0.616805303
PPP3CALIMK20.615363404
PPP3CASTEAP10.613265403
PPP3CATM2D20.612825303

For details and further investigation, click here