PRTN3

 

Full name: proteinase 3 Alias Symbol: PR-3|ACPA|C-ANCA|AGP7|MBT|P29
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 5657 HGNC ID: HGNC:9495 Ensembl Gene: ENSG00000196415 OMIM ID: 177020
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of PRTN3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PRTN3 5657 207341_at 0.0434 0.8797
GSE20347 PRTN3 5657 207341_at -0.0706 0.2450
GSE23400 PRTN3 5657 207341_at -0.0793 0.0021
GSE26886 PRTN3 5657 207341_at 0.2284 0.0349
GSE29001 PRTN3 5657 207341_at -0.1335 0.3285
GSE38129 PRTN3 5657 207341_at -0.1397 0.0049
GSE45670 PRTN3 5657 207341_at 0.0011 0.9899
GSE53622 PRTN3 5657 88453 0.8914 0.0000
GSE53624 PRTN3 5657 88453 0.6456 0.0000
GSE63941 PRTN3 5657 207341_at 0.0557 0.6950
GSE77861 PRTN3 5657 207341_at -0.0751 0.4165
GSE97050 PRTN3 5657 A_23_P142345 -0.0039 0.9909
TCGA PRTN3 5657 RNAseq 1.0452 0.4886

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by PRTN3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PRTN3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PRTN3 5657 4 6 20
GSE20123 PRTN3 5657 4 5 21
GSE43470 PRTN3 5657 1 10 32
GSE46452 PRTN3 5657 47 1 11
GSE47630 PRTN3 5657 5 7 28
GSE54993 PRTN3 5657 13 4 53
GSE54994 PRTN3 5657 8 15 30
GSE60625 PRTN3 5657 9 0 2
GSE74703 PRTN3 5657 1 7 28
GSE74704 PRTN3 5657 3 3 14
TCGA PRTN3 5657 8 25 63

Total number of gains: 103; Total number of losses: 83; Total Number of normals: 302.  


 

Somatic mutations of PRTN3:

 

Generating mutation plots.

 

Highly correlated genes for PRTN3:

 

Showing top 20/395 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PRTN3PLEK0.790976303
PRTN3PDE3B0.777657303
PRTN3LRTOMT0.728076303
PRTN3SLC6A60.723392303
PRTN3SST0.717444404
PRTN3HHLA30.710565303
PRTN3TERF20.707298303
PRTN3ACY10.702599303
PRTN3ZBTB330.702218303
PRTN3IL2RG0.700663303
PRTN3GRIN2B0.697213303
PRTN3RABEP20.696914403
PRTN3CST80.695115303
PRTN3APBA10.692866404
PRTN3PCDH120.691383303
PRTN3MAP1A0.691192303
PRTN3CLDN180.688737403
PRTN3RASSF40.688236403
PRTN3CELA3A0.687932404
PRTN3TCP10L0.68264404

For details and further investigation, click here