RAD54L

 

Full name: RAD54 like Alias Symbol: hHR54|hRAD54|RAD54A
Type: protein-coding gene Cytoband: 1p34.1
Entrez ID: 8438 HGNC ID: HGNC:9826 Ensembl Gene: ENSG00000085999 OMIM ID: 603615
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of RAD54L:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RAD54L 8438 204558_at 1.3183 0.0498
GSE20347 RAD54L 8438 204558_at 1.3405 0.0000
GSE23400 RAD54L 8438 204558_at 0.5576 0.0000
GSE26886 RAD54L 8438 204558_at 0.4325 0.0245
GSE29001 RAD54L 8438 204558_at 1.0212 0.0006
GSE38129 RAD54L 8438 204558_at 1.4120 0.0000
GSE45670 RAD54L 8438 204558_at 0.8152 0.0002
GSE63941 RAD54L 8438 204558_at 1.0091 0.0576
GSE77861 RAD54L 8438 204558_at 0.2628 0.0702
GSE97050 RAD54L 8438 A_23_P74115 0.8933 0.1657
SRP007169 RAD54L 8438 RNAseq 2.5963 0.0005
SRP008496 RAD54L 8438 RNAseq 1.8139 0.0010
SRP064894 RAD54L 8438 RNAseq 1.7195 0.0000
SRP133303 RAD54L 8438 RNAseq 1.1997 0.0000
SRP159526 RAD54L 8438 RNAseq 2.2521 0.0001
SRP193095 RAD54L 8438 RNAseq 1.2270 0.0000
SRP219564 RAD54L 8438 RNAseq 2.2414 0.0017
TCGA RAD54L 8438 RNAseq 1.5733 0.0000

Upregulated datasets: 12; Downregulated datasets: 0.  


 

Survival by RAD54L expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of RAD54L:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RAD54L 8438 4 3 23
GSE20123 RAD54L 8438 4 2 24
GSE43470 RAD54L 8438 5 2 36
GSE46452 RAD54L 8438 2 1 56
GSE47630 RAD54L 8438 8 4 28
GSE54993 RAD54L 8438 0 1 69
GSE54994 RAD54L 8438 11 2 40
GSE60625 RAD54L 8438 0 0 11
GSE74703 RAD54L 8438 4 1 31
GSE74704 RAD54L 8438 2 0 18
TCGA RAD54L 8438 10 17 69

Total number of gains: 50; Total number of losses: 33; Total Number of normals: 405.  


 

Somatic mutations of RAD54L:

 

Generating mutation plots.

 

Highly correlated genes for RAD54L:

 

Showing top 20/1780 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RAD54LSLC39A100.813888303
RAD54LKIF2C0.79159111011
RAD54LGEN10.78986303
RAD54LMCM20.782706909
RAD54LZBTB90.774072303
RAD54LSPNS10.771552303
RAD54LCDCA30.76620810010
RAD54LBUB10.763579808
RAD54LPRTFDC10.76351303
RAD54LDNMT10.76128410010
RAD54LC10orf550.760566303
RAD54LFANCA0.75917808
RAD54LMYBL20.7553241009
RAD54LWDHD10.75513710010
RAD54LCDC200.75381710010
RAD54LG2E30.752252404
RAD54LNCAPH0.751958909
RAD54LSIX40.748089505
RAD54LCCNF0.74791610010
RAD54LRPF20.745938303

For details and further investigation, click here