CCNF

 

Full name: cyclin F Alias Symbol: FBX1|FBXO1
Type: protein-coding gene Cytoband: 16p13.3
Entrez ID: 899 HGNC ID: HGNC:1591 Ensembl Gene: ENSG00000162063 OMIM ID: 600227
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of CCNF:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCNF 899 204826_at 0.8758 0.0378
GSE20347 CCNF 899 204826_at 0.5828 0.0000
GSE23400 CCNF 899 204826_at 0.6937 0.0000
GSE26886 CCNF 899 204826_at 0.4008 0.0351
GSE29001 CCNF 899 204826_at 0.8087 0.0016
GSE38129 CCNF 899 204826_at 0.9461 0.0000
GSE45670 CCNF 899 204826_at 0.9365 0.0000
GSE53622 CCNF 899 57367 1.7226 0.0000
GSE53624 CCNF 899 57367 1.6360 0.0000
GSE63941 CCNF 899 204826_at 1.1534 0.0070
GSE77861 CCNF 899 204826_at 0.1668 0.2616
GSE97050 CCNF 899 A_24_P193592 1.0866 0.1985
SRP007169 CCNF 899 RNAseq 1.6887 0.0004
SRP008496 CCNF 899 RNAseq 1.0242 0.0037
SRP064894 CCNF 899 RNAseq 1.2509 0.0000
SRP133303 CCNF 899 RNAseq 1.4942 0.0000
SRP159526 CCNF 899 RNAseq 1.3501 0.0001
SRP193095 CCNF 899 RNAseq 1.0436 0.0000
SRP219564 CCNF 899 RNAseq 0.9413 0.1035
TCGA CCNF 899 RNAseq 0.8268 0.0000

Upregulated datasets: 9; Downregulated datasets: 0.  


 

Survival by CCNF expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCNF:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCNF 899 5 5 20
GSE20123 CCNF 899 5 4 21
GSE43470 CCNF 899 4 7 32
GSE46452 CCNF 899 38 1 20
GSE47630 CCNF 899 13 6 21
GSE54993 CCNF 899 3 5 62
GSE54994 CCNF 899 5 9 39
GSE60625 CCNF 899 4 0 7
GSE74703 CCNF 899 4 5 27
GSE74704 CCNF 899 3 2 15
TCGA CCNF 899 20 13 63

Total number of gains: 104; Total number of losses: 57; Total Number of normals: 327.  


 

Somatic mutations of CCNF:

 

Generating mutation plots.

 

Highly correlated genes for CCNF:

 

Showing top 20/1887 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCNFUCK20.805302303
CCNFDTL0.79879712012
CCNFSTIL0.79613111011
CCNFMMS22L0.796018303
CCNFUBE2C0.79252212012
CCNFTPX20.78984512012
CCNFKIF2C0.78963912011
CCNFDKC10.788333303
CCNFRACGAP10.787525908
CCNFAURKA0.78692812011
CCNFGINS10.78195312012
CCNFCCNA20.77758711010
CCNFCEP550.77456611010
CCNFCENPN0.77269511010
CCNFWDHD10.77262611011
CCNFLRRC580.771368303
CCNFESCO20.76905707
CCNFMYBL20.76766512012
CCNFBIRC50.76751713012
CCNFCENPW0.767193706

For details and further investigation, click here