Full name: RNA binding motif protein 27 | Alias Symbol: KIAA1311|ARRS1|Psc1|ZC3H20 | ||
Type: protein-coding gene | Cytoband: 5q32 | ||
Entrez ID: 54439 | HGNC ID: HGNC:29243 | Ensembl Gene: ENSG00000091009 | OMIM ID: |
Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of RBM27:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | RBM27 | 54439 | 225326_at | -0.1127 | 0.7655 | |
GSE26886 | RBM27 | 54439 | 225326_at | -0.2567 | 0.1847 | |
GSE45670 | RBM27 | 54439 | 225326_at | -0.3062 | 0.0083 | |
GSE53622 | RBM27 | 54439 | 104353 | -0.0807 | 0.0952 | |
GSE53624 | RBM27 | 54439 | 104353 | 0.2494 | 0.0000 | |
GSE63941 | RBM27 | 54439 | 225326_at | 0.1520 | 0.7949 | |
GSE77861 | RBM27 | 54439 | 243295_at | 0.3860 | 0.3065 | |
GSE97050 | RBM27 | 54439 | A_23_P92786 | 0.1162 | 0.5436 | |
SRP007169 | RBM27 | 54439 | RNAseq | 0.7928 | 0.0884 | |
SRP008496 | RBM27 | 54439 | RNAseq | 0.6868 | 0.0103 | |
SRP064894 | RBM27 | 54439 | RNAseq | -0.1541 | 0.3773 | |
SRP133303 | RBM27 | 54439 | RNAseq | 0.2675 | 0.0289 | |
SRP159526 | RBM27 | 54439 | RNAseq | 0.0007 | 0.9983 | |
SRP193095 | RBM27 | 54439 | RNAseq | -0.0253 | 0.7170 | |
SRP219564 | RBM27 | 54439 | RNAseq | 0.2090 | 0.5559 | |
TCGA | RBM27 | 54439 | RNAseq | 0.0050 | 0.9187 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RBM27 expression:
Note: Click image to view full size file.
Copy number change of RBM27:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | RBM27 | 54439 | 1 | 12 | 17 | |
GSE20123 | RBM27 | 54439 | 1 | 12 | 17 | |
GSE43470 | RBM27 | 54439 | 2 | 9 | 32 | |
GSE46452 | RBM27 | 54439 | 0 | 27 | 32 | |
GSE47630 | RBM27 | 54439 | 0 | 20 | 20 | |
GSE54993 | RBM27 | 54439 | 9 | 1 | 60 | |
GSE54994 | RBM27 | 54439 | 2 | 17 | 34 | |
GSE60625 | RBM27 | 54439 | 0 | 0 | 11 | |
GSE74703 | RBM27 | 54439 | 2 | 7 | 27 | |
GSE74704 | RBM27 | 54439 | 1 | 7 | 12 | |
TCGA | RBM27 | 54439 | 3 | 40 | 53 |
Total number of gains: 21; Total number of losses: 152; Total Number of normals: 315.
Somatic mutations of RBM27:
Generating mutation plots.
Highly correlated genes for RBM27:
Showing top 20/130 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
RBM27 | ZBED6 | 0.765104 | 3 | 0 | 3 |
RBM27 | SPPL3 | 0.735897 | 3 | 0 | 3 |
RBM27 | TRIM23 | 0.708064 | 4 | 0 | 3 |
RBM27 | KRR1 | 0.704023 | 3 | 0 | 3 |
RBM27 | DNTTIP1 | 0.700839 | 3 | 0 | 3 |
RBM27 | HIPK3 | 0.698119 | 3 | 0 | 3 |
RBM27 | SNW1 | 0.695179 | 4 | 0 | 3 |
RBM27 | HEATR3 | 0.6882 | 3 | 0 | 3 |
RBM27 | NUDT3 | 0.686976 | 3 | 0 | 3 |
RBM27 | RLIM | 0.682686 | 3 | 0 | 3 |
RBM27 | TC2N | 0.681429 | 3 | 0 | 3 |
RBM27 | EIF2S2 | 0.67909 | 3 | 0 | 3 |
RBM27 | OSBPL2 | 0.675996 | 3 | 0 | 3 |
RBM27 | RAB13 | 0.671975 | 3 | 0 | 3 |
RBM27 | COX4I1 | 0.671553 | 3 | 0 | 3 |
RBM27 | NDUFS1 | 0.669318 | 3 | 0 | 3 |
RBM27 | PDCD2L | 0.66917 | 3 | 0 | 3 |
RBM27 | EWSR1 | 0.6687 | 3 | 0 | 3 |
RBM27 | SEC22C | 0.667754 | 3 | 0 | 3 |
RBM27 | FBXL17 | 0.667324 | 3 | 0 | 3 |
For details and further investigation, click here