REEP6

 

Full name: receptor accessory protein 6 Alias Symbol: DP1L1|FLJ25383|Yip2f
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 92840 HGNC ID: HGNC:30078 Ensembl Gene: ENSG00000115255 OMIM ID: 609346
Drug and gene relationship at DGIdb

 

Expression of REEP6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 REEP6 92840 226597_at -0.3583 0.6545
GSE26886 REEP6 92840 226597_at -0.7782 0.0046
GSE45670 REEP6 92840 226597_at -0.1805 0.4598
GSE53622 REEP6 92840 18207 -0.1330 0.0648
GSE53624 REEP6 92840 30133 -1.1223 0.0000
GSE63941 REEP6 92840 226597_at 1.5117 0.0306
GSE77861 REEP6 92840 226597_at -0.5586 0.1499
GSE97050 REEP6 92840 A_33_P3369834 -0.1289 0.7141
SRP007169 REEP6 92840 RNAseq -3.9327 0.0000
SRP064894 REEP6 92840 RNAseq -0.3266 0.4065
SRP133303 REEP6 92840 RNAseq -1.5120 0.0000
SRP159526 REEP6 92840 RNAseq -1.4154 0.0001
SRP193095 REEP6 92840 RNAseq -1.5656 0.0000
SRP219564 REEP6 92840 RNAseq -0.0091 0.9911
TCGA REEP6 92840 RNAseq 0.2362 0.1630

Upregulated datasets: 1; Downregulated datasets: 5.  


 

Survival by REEP6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of REEP6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 REEP6 92840 4 6 20
GSE20123 REEP6 92840 4 5 21
GSE43470 REEP6 92840 1 11 31
GSE46452 REEP6 92840 47 1 11
GSE47630 REEP6 92840 5 7 28
GSE54993 REEP6 92840 16 3 51
GSE54994 REEP6 92840 8 15 30
GSE60625 REEP6 92840 9 0 2
GSE74703 REEP6 92840 1 8 27
GSE74704 REEP6 92840 3 3 14
TCGA REEP6 92840 6 25 65

Total number of gains: 104; Total number of losses: 84; Total Number of normals: 300.  


 

Somatic mutations of REEP6:

 

Generating mutation plots.

 

Highly correlated genes for REEP6:

 

Showing top 20/415 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
REEP6RNPEPL10.700536404
REEP6POLR2L0.696056303
REEP6MTMR140.670824303
REEP6MYD880.664041505
REEP6POLR2I0.658794303
REEP6LMNTD20.652888403
REEP6RAB4B0.648615404
REEP6FLT40.6473303
REEP6BCL100.634709303
REEP6AP2M10.634411303
REEP6SH3BGRL30.629873403
REEP6ENSA0.629707606
REEP6CRABP20.628904403
REEP6FBXL160.628408606
REEP6MYL12A0.626208303
REEP6ACY10.624898303
REEP6LLGL20.624832505
REEP6MINK10.622162505
REEP6MOSPD30.62116505
REEP6SH3GL10.616986606

For details and further investigation, click here