RNF112

 

Full name: ring finger protein 112 Alias Symbol: BFP
Type: protein-coding gene Cytoband: 17p11.2
Entrez ID: 7732 HGNC ID: HGNC:12968 Ensembl Gene: ENSG00000128482 OMIM ID: 601237
Drug and gene relationship at DGIdb

 

Expression of RNF112:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RNF112 7732 223603_at -0.2454 0.2731
GSE26886 RNF112 7732 223603_at -0.0119 0.9456
GSE45670 RNF112 7732 223603_at 0.0285 0.9005
GSE53622 RNF112 7732 35148 -0.0950 0.1751
GSE53624 RNF112 7732 35148 -0.1082 0.2460
GSE63941 RNF112 7732 223603_at -0.0198 0.9503
GSE77861 RNF112 7732 223603_at 0.1031 0.4903
GSE97050 RNF112 7732 A_23_P107116 -0.1522 0.6182
SRP064894 RNF112 7732 RNAseq 0.2802 0.4784
SRP133303 RNF112 7732 RNAseq -0.4220 0.2176
SRP159526 RNF112 7732 RNAseq 0.2671 0.4933
SRP219564 RNF112 7732 RNAseq 0.2133 0.7045
TCGA RNF112 7732 RNAseq -0.3045 0.3841

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by RNF112 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RNF112:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RNF112 7732 4 3 23
GSE20123 RNF112 7732 4 4 22
GSE43470 RNF112 7732 1 5 37
GSE46452 RNF112 7732 34 1 24
GSE47630 RNF112 7732 7 1 32
GSE54993 RNF112 7732 3 3 64
GSE54994 RNF112 7732 6 6 41
GSE60625 RNF112 7732 4 0 7
GSE74703 RNF112 7732 1 2 33
GSE74704 RNF112 7732 3 1 16
TCGA RNF112 7732 19 24 53

Total number of gains: 86; Total number of losses: 50; Total Number of normals: 352.  


 

Somatic mutations of RNF112:

 

Generating mutation plots.

 

Highly correlated genes for RNF112:

 

Showing top 20/25 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RNF112KCNT20.668764303
RNF112NPDC10.658957403
RNF112GABARAPL10.619257303
RNF112THAP80.60286403
RNF112PAMR10.596654303
RNF112SMOC20.59624303
RNF112USF20.588965303
RNF112MOAP10.587978403
RNF112FGF20.580812303
RNF112PDE1A0.580229303
RNF112ITIH50.575352403
RNF112ZNF4230.56623403
RNF112ITGA70.557037403
RNF112FGF90.546639303
RNF112TSPYL20.538811403
RNF112CHRDL10.538622403
RNF112PLA2G50.538267403
RNF112RBPMS20.533784503
RNF112SMAD90.530242403
RNF112FZD70.525445403

For details and further investigation, click here