| Full name: SCAN domain containing 1 | Alias Symbol: SDP1|RAZ1 | ||
| Type: protein-coding gene | Cytoband: 20q11.23 | ||
| Entrez ID: 51282 | HGNC ID: HGNC:10566 | Ensembl Gene: ENSG00000171222 | OMIM ID: 610416 |
| Drug and gene relationship at DGIdb | |||
Expression of SCAND1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SCAND1 | 51282 | 218206_x_at | 0.6304 | 0.0562 | |
| GSE20347 | SCAND1 | 51282 | 218206_x_at | 0.1360 | 0.4972 | |
| GSE23400 | SCAND1 | 51282 | 218206_x_at | 0.1686 | 0.0680 | |
| GSE26886 | SCAND1 | 51282 | 218206_x_at | 0.9967 | 0.0000 | |
| GSE29001 | SCAND1 | 51282 | 218206_x_at | 0.1679 | 0.5940 | |
| GSE38129 | SCAND1 | 51282 | 218206_x_at | 0.2671 | 0.0434 | |
| GSE45670 | SCAND1 | 51282 | 218206_x_at | 0.2824 | 0.0578 | |
| GSE53622 | SCAND1 | 51282 | 100043 | 0.4218 | 0.0000 | |
| GSE53624 | SCAND1 | 51282 | 100043 | 0.3738 | 0.0000 | |
| GSE63941 | SCAND1 | 51282 | 218206_x_at | -0.0334 | 0.9551 | |
| GSE77861 | SCAND1 | 51282 | 218206_x_at | 0.2885 | 0.2738 | |
| GSE97050 | SCAND1 | 51282 | A_23_P6196 | 0.3212 | 0.2848 | |
| SRP007169 | SCAND1 | 51282 | RNAseq | -1.0132 | 0.0198 | |
| SRP008496 | SCAND1 | 51282 | RNAseq | -0.7161 | 0.0116 | |
| SRP064894 | SCAND1 | 51282 | RNAseq | 0.1151 | 0.7605 | |
| SRP133303 | SCAND1 | 51282 | RNAseq | 0.1007 | 0.5430 | |
| SRP159526 | SCAND1 | 51282 | RNAseq | 0.3599 | 0.1481 | |
| SRP193095 | SCAND1 | 51282 | RNAseq | -0.1139 | 0.5225 | |
| SRP219564 | SCAND1 | 51282 | RNAseq | 0.3602 | 0.3302 | |
| TCGA | SCAND1 | 51282 | RNAseq | 0.0688 | 0.3010 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SCAND1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SCAND1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SCAND1 | 51282 | 14 | 1 | 15 | |
| GSE20123 | SCAND1 | 51282 | 14 | 1 | 15 | |
| GSE43470 | SCAND1 | 51282 | 12 | 0 | 31 | |
| GSE46452 | SCAND1 | 51282 | 29 | 0 | 30 | |
| GSE47630 | SCAND1 | 51282 | 25 | 0 | 15 | |
| GSE54993 | SCAND1 | 51282 | 0 | 17 | 53 | |
| GSE54994 | SCAND1 | 51282 | 24 | 0 | 29 | |
| GSE60625 | SCAND1 | 51282 | 0 | 0 | 11 | |
| GSE74703 | SCAND1 | 51282 | 11 | 0 | 25 | |
| GSE74704 | SCAND1 | 51282 | 10 | 0 | 10 | |
| TCGA | SCAND1 | 51282 | 49 | 3 | 44 |
Total number of gains: 188; Total number of losses: 22; Total Number of normals: 278.
Somatic mutations of SCAND1:
Generating mutation plots.
Highly correlated genes for SCAND1:
Showing top 20/1021 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SCAND1 | CWF19L1 | 0.79787 | 3 | 0 | 3 |
| SCAND1 | SPEN | 0.740996 | 3 | 0 | 3 |
| SCAND1 | KTI12 | 0.733934 | 3 | 0 | 3 |
| SCAND1 | POGLUT1 | 0.728909 | 3 | 0 | 3 |
| SCAND1 | RAVER1 | 0.727598 | 4 | 0 | 3 |
| SCAND1 | ZNF496 | 0.727287 | 3 | 0 | 3 |
| SCAND1 | METTL23 | 0.726522 | 5 | 0 | 5 |
| SCAND1 | STRADA | 0.722513 | 4 | 0 | 3 |
| SCAND1 | ADRM1 | 0.722155 | 11 | 0 | 11 |
| SCAND1 | PPP1R35 | 0.72027 | 4 | 0 | 3 |
| SCAND1 | CDK18 | 0.717784 | 3 | 0 | 3 |
| SCAND1 | SSBP4 | 0.716277 | 4 | 0 | 3 |
| SCAND1 | RAD54L | 0.709054 | 3 | 0 | 3 |
| SCAND1 | DROSHA | 0.708818 | 3 | 0 | 3 |
| SCAND1 | ZNF518B | 0.707227 | 3 | 0 | 3 |
| SCAND1 | GAR1 | 0.705283 | 3 | 0 | 3 |
| SCAND1 | MAD2L2 | 0.704852 | 5 | 0 | 4 |
| SCAND1 | PACS1 | 0.703629 | 4 | 0 | 3 |
| SCAND1 | LRP6 | 0.703099 | 3 | 0 | 3 |
| SCAND1 | KIFC1 | 0.702696 | 3 | 0 | 3 |
For details and further investigation, click here
