SERPINB4

 

Full name: serpin family B member 4 Alias Symbol: PI11|LEUPIN|SCCA-2|SCCA1
Type: protein-coding gene Cytoband: 18q21.33
Entrez ID: 6318 HGNC ID: HGNC:10570 Ensembl Gene: ENSG00000206073 OMIM ID: 600518
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of SERPINB4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SERPINB4 6318 211906_s_at -2.2295 0.5376
GSE20347 SERPINB4 6318 211906_s_at -3.2481 0.0000
GSE23400 SERPINB4 6318 211906_s_at -2.4282 0.0000
GSE26886 SERPINB4 6318 211906_s_at -6.2239 0.0000
GSE29001 SERPINB4 6318 211906_s_at -3.4173 0.0001
GSE38129 SERPINB4 6318 211906_s_at -1.5870 0.0560
GSE45670 SERPINB4 6318 211906_s_at 0.7393 0.1994
GSE53622 SERPINB4 6318 138320 -2.3796 0.0000
GSE53624 SERPINB4 6318 138320 -2.9135 0.0000
GSE63941 SERPINB4 6318 211906_s_at 1.1108 0.4781
GSE77861 SERPINB4 6318 211906_s_at -0.7618 0.1776
GSE97050 SERPINB4 6318 A_23_P502413 -0.9637 0.5920
SRP007169 SERPINB4 6318 RNAseq -5.5544 0.0000
SRP008496 SERPINB4 6318 RNAseq -3.7374 0.0002
SRP064894 SERPINB4 6318 RNAseq -1.7487 0.0127
SRP133303 SERPINB4 6318 RNAseq -1.1479 0.0569
SRP219564 SERPINB4 6318 RNAseq -1.9619 0.1257
TCGA SERPINB4 6318 RNAseq 1.2953 0.0066

Upregulated datasets: 1; Downregulated datasets: 9.  


 

Survival by SERPINB4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SERPINB4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SERPINB4 6318 1 9 20
GSE20123 SERPINB4 6318 1 9 20
GSE43470 SERPINB4 6318 0 7 36
GSE46452 SERPINB4 6318 1 26 32
GSE47630 SERPINB4 6318 5 21 14
GSE54993 SERPINB4 6318 9 0 61
GSE54994 SERPINB4 6318 1 18 34
GSE60625 SERPINB4 6318 0 4 7
GSE74703 SERPINB4 6318 0 7 29
GSE74704 SERPINB4 6318 1 6 13
TCGA SERPINB4 6318 10 45 41

Total number of gains: 29; Total number of losses: 152; Total Number of normals: 307.  


 

Somatic mutations of SERPINB4:

 

Generating mutation plots.

 

Highly correlated genes for SERPINB4:

 

Showing top 20/1271 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SERPINB4SERPINB30.8764211011
SERPINB4CERS30.770557606
SERPINB4EPGN0.759494303
SERPINB4PGLYRP30.756986404
SERPINB4KLK130.75080412011
SERPINB4MPZL30.748527707
SERPINB4ENDOU0.74752510010
SERPINB4C5orf66-AS10.746516404
SERPINB4FLG0.74644110010
SERPINB4BNIPL0.742672605
SERPINB4SERPINB10.73845712011
SERPINB4SPAG170.737822404
SERPINB4NIPAL10.737637303
SERPINB4SCEL0.73632312011
SERPINB4IL180.73630610010
SERPINB4CRABP20.7360851009
SERPINB4TMPRSS11D0.73388712011
SERPINB4TMPRSS11E0.73268612010
SERPINB4HOPX0.73245311010
SERPINB4CXCR20.729071909

For details and further investigation, click here