| Full name: serine rich and transmembrane domain containing 1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 13q13.3 | ||
| Entrez ID: 400120 | HGNC ID: HGNC:33792 | Ensembl Gene: ENSG00000180440 | OMIM ID: |
Expression of SERTM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SERTM1 | 400120 | 241672_at | -0.0601 | 0.8326 | |
| GSE26886 | SERTM1 | 400120 | 241672_at | 0.0216 | 0.8932 | |
| GSE45670 | SERTM1 | 400120 | 241672_at | 0.1113 | 0.6564 | |
| GSE53622 | SERTM1 | 400120 | 114585 | -0.1964 | 0.0652 | |
| GSE53624 | SERTM1 | 400120 | 114585 | 0.1798 | 0.0568 | |
| GSE63941 | SERTM1 | 400120 | 241672_at | -0.0817 | 0.5400 | |
| GSE77861 | SERTM1 | 400120 | 241672_at | -0.0441 | 0.5808 | |
| GSE97050 | SERTM1 | 400120 | A_24_P366607 | -0.0348 | 0.8893 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SERTM1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SERTM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SERTM1 | 400120 | 0 | 16 | 14 | |
| GSE20123 | SERTM1 | 400120 | 0 | 15 | 15 | |
| GSE43470 | SERTM1 | 400120 | 2 | 13 | 28 | |
| GSE46452 | SERTM1 | 400120 | 0 | 33 | 26 | |
| GSE47630 | SERTM1 | 400120 | 2 | 27 | 11 | |
| GSE54993 | SERTM1 | 400120 | 12 | 2 | 56 | |
| GSE54994 | SERTM1 | 400120 | 1 | 17 | 35 | |
| GSE60625 | SERTM1 | 400120 | 0 | 3 | 8 | |
| GSE74703 | SERTM1 | 400120 | 2 | 10 | 24 | |
| GSE74704 | SERTM1 | 400120 | 0 | 12 | 8 | |
| TCGA | SERTM1 | 400120 | 7 | 40 | 49 |
Total number of gains: 26; Total number of losses: 188; Total Number of normals: 274.
Somatic mutations of SERTM1:
Generating mutation plots.
Highly correlated genes for SERTM1:
Showing top 20/52 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SERTM1 | SLC22A7 | 0.771184 | 3 | 0 | 3 |
| SERTM1 | NEUROG1 | 0.745593 | 3 | 0 | 3 |
| SERTM1 | DRD3 | 0.727949 | 3 | 0 | 3 |
| SERTM1 | TMEM229A | 0.726227 | 3 | 0 | 3 |
| SERTM1 | GFRA2 | 0.723255 | 3 | 0 | 3 |
| SERTM1 | CLCNKA | 0.717153 | 3 | 0 | 3 |
| SERTM1 | CLDN9 | 0.716566 | 3 | 0 | 3 |
| SERTM1 | ESR1 | 0.716252 | 3 | 0 | 3 |
| SERTM1 | ST8SIA3 | 0.713903 | 3 | 0 | 3 |
| SERTM1 | CRB2 | 0.711978 | 3 | 0 | 3 |
| SERTM1 | CHRND | 0.709932 | 3 | 0 | 3 |
| SERTM1 | TBX10 | 0.706965 | 4 | 0 | 3 |
| SERTM1 | USH1C | 0.70247 | 3 | 0 | 3 |
| SERTM1 | TNR | 0.682879 | 4 | 0 | 3 |
| SERTM1 | TDGF1 | 0.665189 | 3 | 0 | 3 |
| SERTM1 | OR2C1 | 0.659759 | 4 | 0 | 4 |
| SERTM1 | SLC5A5 | 0.655453 | 3 | 0 | 3 |
| SERTM1 | SNED1 | 0.64719 | 4 | 0 | 3 |
| SERTM1 | DNAH6 | 0.643462 | 4 | 0 | 3 |
| SERTM1 | GATA4 | 0.639687 | 3 | 0 | 3 |
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