SH3D19

 

Full name: SH3 domain containing 19 Alias Symbol: DKFZp434D0215|EVE1|EBP|Kryn|SH3P19|Eve-1
Type: protein-coding gene Cytoband: 4q31.3
Entrez ID: 152503 HGNC ID: HGNC:30418 Ensembl Gene: ENSG00000109686 OMIM ID: 608674
Drug and gene relationship at DGIdb

 

Expression of SH3D19:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SH3D19 152503 225162_at -0.4369 0.5327
GSE26886 SH3D19 152503 225162_at -1.2550 0.0000
GSE45670 SH3D19 152503 225162_at -0.8612 0.0000
GSE53622 SH3D19 152503 61087 -1.0295 0.0000
GSE53624 SH3D19 152503 61087 -1.1726 0.0000
GSE63941 SH3D19 152503 225162_at -2.0563 0.0000
GSE77861 SH3D19 152503 225162_at -0.4172 0.1229
GSE97050 SH3D19 152503 A_23_P33364 -0.5785 0.1399
SRP007169 SH3D19 152503 RNAseq -0.9533 0.0726
SRP008496 SH3D19 152503 RNAseq -1.1436 0.0005
SRP064894 SH3D19 152503 RNAseq -0.9331 0.0009
SRP133303 SH3D19 152503 RNAseq -0.2432 0.3846
SRP159526 SH3D19 152503 RNAseq -0.8818 0.0051
SRP193095 SH3D19 152503 RNAseq -0.8613 0.0000
SRP219564 SH3D19 152503 RNAseq -0.8835 0.1118
TCGA SH3D19 152503 RNAseq -0.2026 0.0003

Upregulated datasets: 0; Downregulated datasets: 5.  


 

Survival by SH3D19 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SH3D19:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SH3D19 152503 1 13 16
GSE20123 SH3D19 152503 1 13 16
GSE43470 SH3D19 152503 0 14 29
GSE46452 SH3D19 152503 1 36 22
GSE47630 SH3D19 152503 0 23 17
GSE54993 SH3D19 152503 10 0 60
GSE54994 SH3D19 152503 1 12 40
GSE60625 SH3D19 152503 0 1 10
GSE74703 SH3D19 152503 0 12 24
GSE74704 SH3D19 152503 0 7 13
TCGA SH3D19 152503 10 35 51

Total number of gains: 24; Total number of losses: 166; Total Number of normals: 298.  


 

Somatic mutations of SH3D19:

 

Generating mutation plots.

 

Highly correlated genes for SH3D19:

 

Showing top 20/1431 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SH3D19CLEC3B0.779106303
SH3D19CYP21A20.774201303
SH3D19CHRDL10.770736303
SH3D19KAT2B0.768949707
SH3D19UTRN0.766413404
SH3D19FCER1A0.765268505
SH3D19C70.759065404
SH3D19RAP1A0.752859707
SH3D19EXOC6B0.749453303
SH3D19FAM214A0.749295505
SH3D19SLC2A40.746845303
SH3D19LMOD10.744594505
SH3D19ZNF4070.743656303
SH3D19CAB39L0.74294706
SH3D19MXI10.738668505
SH3D19ARHGEF10L0.736313606
SH3D19ACOT120.734637404
SH3D19CBX70.734615404
SH3D19TMOD30.733575505
SH3D19SLC12A60.733015303

For details and further investigation, click here