SHISA2

 

Full name: shisa family member 2 Alias Symbol: bA398O19.2|PRO28631|WGAR9166|hShisa
Type: protein-coding gene Cytoband: 13q12.13
Entrez ID: 387914 HGNC ID: HGNC:20366 Ensembl Gene: ENSG00000180730 OMIM ID: 617324
Drug and gene relationship at DGIdb

 

Expression of SHISA2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SHISA2 387914 230493_at 1.8866 0.1928
GSE26886 SHISA2 387914 230493_at 3.7912 0.0000
GSE45670 SHISA2 387914 230493_at 1.7150 0.0309
GSE53622 SHISA2 387914 107667 3.6576 0.0000
GSE53624 SHISA2 387914 107667 3.6490 0.0000
GSE63941 SHISA2 387914 230493_at 0.6724 0.5769
GSE77861 SHISA2 387914 230493_at 2.2775 0.0076
SRP007169 SHISA2 387914 RNAseq 4.8261 0.0004
SRP008496 SHISA2 387914 RNAseq 4.0927 0.0000
SRP064894 SHISA2 387914 RNAseq 3.4585 0.0000
SRP133303 SHISA2 387914 RNAseq 2.3619 0.0000
SRP159526 SHISA2 387914 RNAseq 6.5520 0.0000
SRP193095 SHISA2 387914 RNAseq 1.8981 0.0000
SRP219564 SHISA2 387914 RNAseq 1.5582 0.0002
TCGA SHISA2 387914 RNAseq 0.8484 0.0094

Upregulated datasets: 12; Downregulated datasets: 0.  


 

Survival by SHISA2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SHISA2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SHISA2 387914 1 12 17
GSE20123 SHISA2 387914 1 11 18
GSE43470 SHISA2 387914 2 12 29
GSE46452 SHISA2 387914 0 33 26
GSE47630 SHISA2 387914 3 26 11
GSE54993 SHISA2 387914 11 2 57
GSE54994 SHISA2 387914 1 13 39
GSE60625 SHISA2 387914 0 3 8
GSE74703 SHISA2 387914 2 9 25
GSE74704 SHISA2 387914 0 9 11
TCGA SHISA2 387914 6 44 46

Total number of gains: 27; Total number of losses: 174; Total Number of normals: 287.  


 

Somatic mutations of SHISA2:

 

Generating mutation plots.

 

Highly correlated genes for SHISA2:

 

Showing top 20/1313 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SHISA2FZD20.772811505
SHISA2PXDN0.772183606
SHISA2CD2760.762033404
SHISA2NCAPH0.749701404
SHISA2LARP60.744964606
SHISA2UBE2T0.741847606
SHISA2GCLC0.741241303
SHISA2KHSRP0.735709303
SHISA2SNRPE0.733415505
SHISA2RANBP10.731575606
SHISA2PRR5L0.730304605
SHISA2UBE2S0.728212404
SHISA2CDK40.727104606
SHISA2CDH110.725837707
SHISA2RAI140.72395606
SHISA2NUAK10.72175606
SHISA2TBCE0.721371303
SHISA2NOX40.715877505
SHISA2WDR540.715373606
SHISA2MTERF30.714467303

For details and further investigation, click here