SLC43A3

 

Full name: solute carrier family 43 member 3 Alias Symbol: SEEEG-1|Eeg1|DKFZp762A227|FOAP-13|PRO1659
Type: protein-coding gene Cytoband: 11q12.1
Entrez ID: 29015 HGNC ID: HGNC:17466 Ensembl Gene: ENSG00000134802 OMIM ID: 618034
Drug and gene relationship at DGIdb

 

Expression of SLC43A3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC43A3 29015 213113_s_at -0.1428 0.7527
GSE20347 SLC43A3 29015 213113_s_at -0.2587 0.4075
GSE23400 SLC43A3 29015 213113_s_at -0.0914 0.1792
GSE26886 SLC43A3 29015 213113_s_at -0.6599 0.0351
GSE29001 SLC43A3 29015 213113_s_at -0.1949 0.4637
GSE38129 SLC43A3 29015 213113_s_at -0.1739 0.4007
GSE45670 SLC43A3 29015 213113_s_at -0.3284 0.2688
GSE53622 SLC43A3 29015 20427 0.0523 0.6452
GSE53624 SLC43A3 29015 20427 0.0231 0.8209
GSE63941 SLC43A3 29015 213113_s_at -2.0122 0.0243
GSE77861 SLC43A3 29015 213113_s_at -0.5689 0.0783
GSE97050 SLC43A3 29015 A_24_P406986 0.4451 0.1986
SRP007169 SLC43A3 29015 RNAseq -0.1334 0.8046
SRP008496 SLC43A3 29015 RNAseq -0.4458 0.1951
SRP064894 SLC43A3 29015 RNAseq 0.4205 0.0539
SRP133303 SLC43A3 29015 RNAseq -0.1808 0.4396
SRP159526 SLC43A3 29015 RNAseq -0.0666 0.8853
SRP193095 SLC43A3 29015 RNAseq 0.2381 0.3337
SRP219564 SLC43A3 29015 RNAseq -0.1349 0.6100
TCGA SLC43A3 29015 RNAseq 0.0265 0.8092

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by SLC43A3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC43A3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC43A3 29015 2 3 25
GSE20123 SLC43A3 29015 2 3 25
GSE43470 SLC43A3 29015 1 5 37
GSE46452 SLC43A3 29015 8 4 47
GSE47630 SLC43A3 29015 3 9 28
GSE54993 SLC43A3 29015 3 0 67
GSE54994 SLC43A3 29015 5 6 42
GSE60625 SLC43A3 29015 0 3 8
GSE74703 SLC43A3 29015 1 3 32
GSE74704 SLC43A3 29015 2 3 15
TCGA SLC43A3 29015 14 10 72

Total number of gains: 41; Total number of losses: 49; Total Number of normals: 398.  


 

Somatic mutations of SLC43A3:

 

Generating mutation plots.

 

Highly correlated genes for SLC43A3:

 

Showing top 20/257 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC43A3NDUFS40.795609303
SLC43A3HEXB0.767771303
SLC43A3PDZD110.746625303
SLC43A3STT3B0.727174404
SLC43A3ZCCHC90.723955303
SLC43A3AMOTL10.713289303
SLC43A3CETN30.709669303
SLC43A3POLI0.700544303
SLC43A3FBXL30.699514303
SLC43A3SMAP10.697291303
SLC43A3MALT10.697259403
SLC43A3SEMA6A0.691087404
SLC43A3MMADHC0.689772303
SLC43A3MZF10.684353303
SLC43A3STAU20.680062303
SLC43A3CHRDL20.677597303
SLC43A3NDUFAF20.67484303
SLC43A3NSFL1C0.674655303
SLC43A3SNX20.674068303
SLC43A3MCFD20.664448403

For details and further investigation, click here