Full name: small integral membrane protein 3	Alias Symbol: MSTP150|NID67
Type: protein-coding gene	Cytoband: 5q33.1
Entrez ID: 85027	HGNC ID: HGNC:30248	Ensembl Gene: ENSG00000256235	OMIM ID: 608324
Drug and gene relationship at DGIdb

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Expression of SMIM3:

 

Dataset	Gene	EntrezID	Probe	Log2FC	Adj.pValue	Expression
GSE17351	SMIM3	85027	223276_at	-0.0009	0.9994	Show
GSE26886	SMIM3	85027	223276_at	1.5419	0.0003	Show
GSE45670	SMIM3	85027	223276_at	0.3129	0.5068	Show
GSE53622	SMIM3	85027	96268	0.7262	0.0000	Show
GSE53624	SMIM3	85027	96268	0.9029	0.0000	Show
GSE63941	SMIM3	85027	223276_at	-1.9608	0.0133	Show
GSE77861	SMIM3	85027	223276_at	0.5384	0.2815	Show
SRP007169	SMIM3	85027	RNAseq	1.7440	0.0057	Show
SRP008496	SMIM3	85027	RNAseq	1.6019	0.0002	Show
SRP064894	SMIM3	85027	RNAseq	0.9954	0.0005	Show
SRP133303	SMIM3	85027	RNAseq	1.2983	0.0044	Show
SRP159526	SMIM3	85027	RNAseq	-0.1635	0.6167	Show
SRP193095	SMIM3	85027	RNAseq	0.7419	0.0013	Show
SRP219564	SMIM3	85027	RNAseq	0.6545	0.0981	Show

Upregulated datasets: 4; Downregulated datasets: 1.  Download Data

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Survival by SMIM3 expression:

 

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Copy number change of SMIM3:

 

Dataset	Gene	EntrezID	Gain	Loss	Normal	Detail
GSE15526	SMIM3	85027	1	12	17	Show
GSE20123	SMIM3	85027	1	12	17	Show
GSE43470	SMIM3	85027	1	10	32	Show
GSE46452	SMIM3	85027	0	27	32	Show
GSE47630	SMIM3	85027	0	20	20	Show
GSE54993	SMIM3	85027	9	2	59	Show
GSE54994	SMIM3	85027	4	14	35	Show
GSE60625	SMIM3	85027	0	0	11	Show
GSE74703	SMIM3	85027	1	7	28	Show
GSE74704	SMIM3	85027	1	7	12	Show
TCGA	SMIM3	85027	5	37	54	Show

Total number of gains: 23; Total number of losses: 148; Total Number of normals: 317.  Download Data

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Somatic mutations of SMIM3:

 

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Highly correlated genes for SMIM3:

 

Showing top 20/450 corelated genes with mean PCC>0.5.

Gene1	Gene2	Mean PCC	Num. Datasets	Num. PCC<0	Num. PCC>0.5
SMIM3	HSD17B2	0.740383	3	0	3
SMIM3	HCFC1R1	0.72447	3	0	3
SMIM3	KLF10	0.71595	4	0	4
SMIM3	CSGALNACT2	0.712495	7	0	7
SMIM3	PLA2G15	0.699627	3	0	3
SMIM3	NID2	0.699153	4	0	4
SMIM3	LHFPL2	0.692965	7	0	7
SMIM3	COL6A3	0.677878	6	0	6
SMIM3	SERPINE1	0.674924	7	0	6
SMIM3	TBX2	0.674455	3	0	3
SMIM3	PDGFRB	0.673183	5	0	5
SMIM3	PPP1R18	0.671539	6	0	5
SMIM3	AP5S1	0.667301	3	0	3
SMIM3	PMEPA1	0.664955	6	0	5
SMIM3	OLFML2B	0.661385	6	0	6
SMIM3	FBLIM1	0.660783	5	0	5
SMIM3	MSN	0.659074	6	0	6
SMIM3	KLF7	0.657623	7	0	7
SMIM3	DSE	0.657604	5	0	5
SMIM3	STX1A	0.656164	3	0	3

For details and further investigation, click here