| Full name: small VCP interacting protein | Alias Symbol: DKFZp313A2432 | ||
| Type: protein-coding gene | Cytoband: 11p14.3 | ||
| Entrez ID: 258010 | HGNC ID: HGNC:25238 | Ensembl Gene: ENSG00000198168 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of SVIP:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SVIP | 258010 | 226278_at | -1.1757 | 0.2846 | |
| GSE26886 | SVIP | 258010 | 226278_at | -1.0577 | 0.0292 | |
| GSE45670 | SVIP | 258010 | 226278_at | -1.2359 | 0.0049 | |
| GSE53622 | SVIP | 258010 | 168074 | -2.3597 | 0.0000 | |
| GSE53624 | SVIP | 258010 | 168074 | -2.3910 | 0.0000 | |
| GSE63941 | SVIP | 258010 | 226278_at | -1.8642 | 0.2974 | |
| GSE77861 | SVIP | 258010 | 226278_at | -1.8065 | 0.0041 | |
| GSE97050 | SVIP | 258010 | A_24_P111242 | -0.8222 | 0.2142 | |
| SRP007169 | SVIP | 258010 | RNAseq | -2.6509 | 0.0000 | |
| SRP008496 | SVIP | 258010 | RNAseq | -1.6412 | 0.0896 | |
| SRP064894 | SVIP | 258010 | RNAseq | -1.7937 | 0.0000 | |
| SRP133303 | SVIP | 258010 | RNAseq | -1.3527 | 0.0017 | |
| SRP159526 | SVIP | 258010 | RNAseq | -0.5824 | 0.1205 | |
| SRP193095 | SVIP | 258010 | RNAseq | -1.7624 | 0.0000 | |
| SRP219564 | SVIP | 258010 | RNAseq | -1.7467 | 0.0027 | |
| TCGA | SVIP | 258010 | RNAseq | -0.8673 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 10.
Survival by SVIP expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SVIP:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SVIP | 258010 | 0 | 11 | 19 | |
| GSE20123 | SVIP | 258010 | 0 | 11 | 19 | |
| GSE43470 | SVIP | 258010 | 1 | 6 | 36 | |
| GSE46452 | SVIP | 258010 | 7 | 5 | 47 | |
| GSE47630 | SVIP | 258010 | 3 | 10 | 27 | |
| GSE54993 | SVIP | 258010 | 3 | 0 | 67 | |
| GSE54994 | SVIP | 258010 | 3 | 12 | 38 | |
| GSE60625 | SVIP | 258010 | 0 | 0 | 11 | |
| GSE74703 | SVIP | 258010 | 1 | 4 | 31 | |
| GSE74704 | SVIP | 258010 | 0 | 9 | 11 | |
| TCGA | SVIP | 258010 | 12 | 24 | 60 |
Total number of gains: 30; Total number of losses: 92; Total Number of normals: 366.
Somatic mutations of SVIP:
Generating mutation plots.
Highly correlated genes for SVIP:
Showing top 20/1388 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SVIP | CCIN | 0.796573 | 3 | 0 | 3 |
| SVIP | ARHGEF7 | 0.784111 | 3 | 0 | 3 |
| SVIP | HPGD | 0.77031 | 7 | 0 | 7 |
| SVIP | ECHDC2 | 0.766069 | 7 | 0 | 7 |
| SVIP | SETMAR | 0.763669 | 5 | 0 | 5 |
| SVIP | GPD1L | 0.760528 | 7 | 0 | 7 |
| SVIP | GNG5 | 0.759259 | 3 | 0 | 3 |
| SVIP | METTL7A | 0.75691 | 7 | 0 | 7 |
| SVIP | ID4 | 0.754735 | 5 | 0 | 5 |
| SVIP | EPB41L4A | 0.750561 | 3 | 0 | 3 |
| SVIP | GATM | 0.750488 | 6 | 0 | 6 |
| SVIP | ARHGEF10L | 0.749472 | 6 | 0 | 6 |
| SVIP | KIAA0232 | 0.749214 | 6 | 0 | 6 |
| SVIP | CAB39L | 0.747146 | 7 | 0 | 7 |
| SVIP | NFIX | 0.744181 | 6 | 0 | 6 |
| SVIP | ZNF436 | 0.740234 | 3 | 0 | 3 |
| SVIP | GLTP | 0.738957 | 3 | 0 | 3 |
| SVIP | STK39 | 0.730416 | 7 | 0 | 6 |
| SVIP | CLEC3B | 0.728279 | 3 | 0 | 3 |
| SVIP | RAB11A | 0.725112 | 6 | 0 | 5 |
For details and further investigation, click here
