| Full name: SWI5 homologous recombination repair protein | Alias Symbol: bA395P17.9|SAE3 | ||
| Type: protein-coding gene | Cytoband: 9q34.11 | ||
| Entrez ID: 375757 | HGNC ID: HGNC:31412 | Ensembl Gene: ENSG00000175854 | OMIM ID: 616528 |
Expression of SWI5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SWI5 | 375757 | 226027_at | -0.0298 | 0.9284 | |
| GSE26886 | SWI5 | 375757 | 226027_at | 0.6595 | 0.0037 | |
| GSE45670 | SWI5 | 375757 | 226027_at | 0.1267 | 0.4303 | |
| GSE53622 | SWI5 | 375757 | 54044 | 0.1360 | 0.0640 | |
| GSE53624 | SWI5 | 375757 | 54044 | 0.0861 | 0.4046 | |
| GSE63941 | SWI5 | 375757 | 226027_at | -0.4743 | 0.3272 | |
| GSE77861 | SWI5 | 375757 | 226027_at | -0.0680 | 0.7804 | |
| GSE97050 | SWI5 | 375757 | A_23_P392222 | 0.3049 | 0.2292 | |
| SRP007169 | SWI5 | 375757 | RNAseq | -0.2701 | 0.5855 | |
| SRP008496 | SWI5 | 375757 | RNAseq | -0.5395 | 0.1079 | |
| SRP064894 | SWI5 | 375757 | RNAseq | 0.8799 | 0.0124 | |
| SRP133303 | SWI5 | 375757 | RNAseq | 0.1841 | 0.2670 | |
| SRP159526 | SWI5 | 375757 | RNAseq | 0.3693 | 0.0398 | |
| SRP193095 | SWI5 | 375757 | RNAseq | -0.1431 | 0.3309 | |
| SRP219564 | SWI5 | 375757 | RNAseq | -0.3713 | 0.2427 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SWI5 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of SWI5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SWI5 | 375757 | 6 | 9 | 15 | |
| GSE20123 | SWI5 | 375757 | 6 | 9 | 15 | |
| GSE43470 | SWI5 | 375757 | 5 | 7 | 31 | |
| GSE46452 | SWI5 | 375757 | 6 | 13 | 40 | |
| GSE47630 | SWI5 | 375757 | 3 | 16 | 21 | |
| GSE54993 | SWI5 | 375757 | 3 | 3 | 64 | |
| GSE54994 | SWI5 | 375757 | 11 | 8 | 34 | |
| GSE60625 | SWI5 | 375757 | 0 | 0 | 11 | |
| GSE74703 | SWI5 | 375757 | 5 | 5 | 26 | |
| GSE74704 | SWI5 | 375757 | 3 | 7 | 10 | |
| TCGA | SWI5 | 375757 | 26 | 26 | 44 |
Total number of gains: 74; Total number of losses: 103; Total Number of normals: 311.
Somatic mutations of SWI5:
Generating mutation plots.
Highly correlated genes for SWI5:
Showing top 20/56 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SWI5 | CACNA1A | 0.733299 | 3 | 0 | 3 |
| SWI5 | GBX2 | 0.685145 | 3 | 0 | 3 |
| SWI5 | BEND4 | 0.680722 | 3 | 0 | 3 |
| SWI5 | GPN2 | 0.673249 | 4 | 0 | 4 |
| SWI5 | SPTB | 0.664458 | 3 | 0 | 3 |
| SWI5 | MIB2 | 0.644425 | 3 | 0 | 3 |
| SWI5 | PPIL2 | 0.636459 | 3 | 0 | 3 |
| SWI5 | KHDC3L | 0.625793 | 3 | 0 | 3 |
| SWI5 | TRIM41 | 0.625605 | 3 | 0 | 3 |
| SWI5 | RPUSD1 | 0.607592 | 4 | 0 | 4 |
| SWI5 | TRAPPC5 | 0.604039 | 3 | 0 | 3 |
| SWI5 | TREH | 0.602779 | 3 | 0 | 3 |
| SWI5 | TOE1 | 0.596498 | 3 | 0 | 3 |
| SWI5 | GABRQ | 0.591568 | 4 | 0 | 3 |
| SWI5 | MED11 | 0.591314 | 3 | 0 | 3 |
| SWI5 | ENDOG | 0.590426 | 6 | 0 | 4 |
| SWI5 | MIIP | 0.587675 | 3 | 0 | 3 |
| SWI5 | SURF2 | 0.582466 | 6 | 0 | 5 |
| SWI5 | COQ4 | 0.581247 | 4 | 0 | 3 |
| SWI5 | KIF17 | 0.579805 | 3 | 0 | 3 |
For details and further investigation, click here
