| Full name: testis development related 1 | Alias Symbol: LINC00532|lincRNA-NR_024015 | ||
| Type: non-coding RNA | Cytoband: 6p21.2 | ||
| Entrez ID: 732253 | HGNC ID: HGNC:43642 | Ensembl Gene: ENSG00000204091 | OMIM ID: 615676 |
| Drug and gene relationship at DGIdb | |||
Expression of TDRG1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TDRG1 | 732253 | 230236_at | 0.1399 | 0.9518 | |
| GSE26886 | TDRG1 | 732253 | 230236_at | -0.6493 | 0.0396 | |
| GSE45670 | TDRG1 | 732253 | 230236_at | -0.0350 | 0.9348 | |
| GSE53622 | TDRG1 | 732253 | 60393 | -1.8009 | 0.0000 | |
| GSE53624 | TDRG1 | 732253 | 56935 | -2.9054 | 0.0000 | |
| GSE63941 | TDRG1 | 732253 | 230236_at | 0.0979 | 0.6071 | |
| GSE77861 | TDRG1 | 732253 | 230236_at | 0.0065 | 0.9814 | |
| SRP007169 | TDRG1 | 732253 | RNAseq | -8.7389 | 0.0000 | |
| TCGA | TDRG1 | 732253 | RNAseq | 3.5413 | 0.0014 |
Upregulated datasets: 1; Downregulated datasets: 3.
Survival by TDRG1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TDRG1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TDRG1 | 732253 | 2 | 2 | 26 | |
| GSE20123 | TDRG1 | 732253 | 2 | 2 | 26 | |
| GSE43470 | TDRG1 | 732253 | 6 | 0 | 37 | |
| GSE46452 | TDRG1 | 732253 | 2 | 9 | 48 | |
| GSE47630 | TDRG1 | 732253 | 8 | 4 | 28 | |
| GSE54993 | TDRG1 | 732253 | 3 | 2 | 65 | |
| GSE54994 | TDRG1 | 732253 | 10 | 4 | 39 | |
| GSE60625 | TDRG1 | 732253 | 0 | 1 | 10 | |
| GSE74703 | TDRG1 | 732253 | 6 | 0 | 30 | |
| GSE74704 | TDRG1 | 732253 | 1 | 1 | 18 | |
| TCGA | TDRG1 | 732253 | 20 | 14 | 62 |
Total number of gains: 60; Total number of losses: 39; Total Number of normals: 389.
Somatic mutations of TDRG1:
Generating mutation plots.
Highly correlated genes for TDRG1:
Showing top 20/109 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TDRG1 | CTNNBIP1 | 0.713995 | 3 | 0 | 3 |
| TDRG1 | ECHS1 | 0.703572 | 3 | 0 | 3 |
| TDRG1 | PWWP2B | 0.689759 | 3 | 0 | 3 |
| TDRG1 | GYS2 | 0.685204 | 3 | 0 | 3 |
| TDRG1 | TRIP10 | 0.683974 | 3 | 0 | 3 |
| TDRG1 | YOD1 | 0.652177 | 3 | 0 | 3 |
| TDRG1 | EVPL | 0.652046 | 3 | 0 | 3 |
| TDRG1 | RAET1E | 0.65011 | 3 | 0 | 3 |
| TDRG1 | SPATA5L1 | 0.641849 | 3 | 0 | 3 |
| TDRG1 | GRIK3 | 0.641153 | 3 | 0 | 3 |
| TDRG1 | NLRX1 | 0.636396 | 3 | 0 | 3 |
| TDRG1 | ANKRD31 | 0.629207 | 3 | 0 | 3 |
| TDRG1 | CCDC12 | 0.628144 | 3 | 0 | 3 |
| TDRG1 | VSIG2 | 0.625727 | 3 | 0 | 3 |
| TDRG1 | SLC37A1 | 0.623865 | 3 | 0 | 3 |
| TDRG1 | GIPC1 | 0.622852 | 3 | 0 | 3 |
| TDRG1 | MOV10L1 | 0.621921 | 3 | 0 | 3 |
| TDRG1 | TMPRSS2 | 0.621319 | 4 | 0 | 3 |
| TDRG1 | BLOC1S1 | 0.620139 | 3 | 0 | 3 |
| TDRG1 | SYT8 | 0.619334 | 3 | 0 | 3 |
For details and further investigation, click here
