| Full name: transmembrane 9 superfamily member 4 | Alias Symbol: KIAA0255|dJ836N17.2 | ||
| Type: protein-coding gene | Cytoband: 20q11.21 | ||
| Entrez ID: 9777 | HGNC ID: HGNC:30797 | Ensembl Gene: ENSG00000101337 | OMIM ID: 617727 |
| Drug and gene relationship at DGIdb | |||
Expression of TM9SF4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TM9SF4 | 9777 | 212194_s_at | 0.7013 | 0.1491 | |
| GSE20347 | TM9SF4 | 9777 | 212198_s_at | -0.1526 | 0.3471 | |
| GSE23400 | TM9SF4 | 9777 | 212198_s_at | 0.0857 | 0.1601 | |
| GSE26886 | TM9SF4 | 9777 | 212194_s_at | -1.1972 | 0.0000 | |
| GSE29001 | TM9SF4 | 9777 | 212194_s_at | -0.1620 | 0.6569 | |
| GSE38129 | TM9SF4 | 9777 | 212198_s_at | 0.0086 | 0.9542 | |
| GSE45670 | TM9SF4 | 9777 | 212194_s_at | 0.3752 | 0.0265 | |
| GSE53622 | TM9SF4 | 9777 | 23997 | 0.0211 | 0.7908 | |
| GSE53624 | TM9SF4 | 9777 | 23997 | -0.0872 | 0.1068 | |
| GSE63941 | TM9SF4 | 9777 | 212194_s_at | 1.1443 | 0.0113 | |
| GSE77861 | TM9SF4 | 9777 | 212198_s_at | -0.1037 | 0.6824 | |
| GSE97050 | TM9SF4 | 9777 | A_24_P14531 | 0.1662 | 0.6037 | |
| SRP007169 | TM9SF4 | 9777 | RNAseq | -0.7216 | 0.0341 | |
| SRP008496 | TM9SF4 | 9777 | RNAseq | -0.4664 | 0.0127 | |
| SRP064894 | TM9SF4 | 9777 | RNAseq | 0.3847 | 0.0366 | |
| SRP133303 | TM9SF4 | 9777 | RNAseq | 0.1151 | 0.4293 | |
| SRP159526 | TM9SF4 | 9777 | RNAseq | -0.1345 | 0.6117 | |
| SRP193095 | TM9SF4 | 9777 | RNAseq | 0.0141 | 0.8870 | |
| SRP219564 | TM9SF4 | 9777 | RNAseq | 0.4997 | 0.0917 | |
| TCGA | TM9SF4 | 9777 | RNAseq | 0.0756 | 0.0750 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by TM9SF4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TM9SF4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TM9SF4 | 9777 | 15 | 0 | 15 | |
| GSE20123 | TM9SF4 | 9777 | 15 | 0 | 15 | |
| GSE43470 | TM9SF4 | 9777 | 11 | 0 | 32 | |
| GSE46452 | TM9SF4 | 9777 | 29 | 0 | 30 | |
| GSE47630 | TM9SF4 | 9777 | 25 | 0 | 15 | |
| GSE54993 | TM9SF4 | 9777 | 0 | 18 | 52 | |
| GSE54994 | TM9SF4 | 9777 | 26 | 3 | 24 | |
| GSE60625 | TM9SF4 | 9777 | 0 | 0 | 11 | |
| GSE74703 | TM9SF4 | 9777 | 10 | 0 | 26 | |
| GSE74704 | TM9SF4 | 9777 | 10 | 0 | 10 | |
| TCGA | TM9SF4 | 9777 | 49 | 1 | 46 |
Total number of gains: 190; Total number of losses: 22; Total Number of normals: 276.
Somatic mutations of TM9SF4:
Generating mutation plots.
Highly correlated genes for TM9SF4:
Showing top 20/161 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TM9SF4 | DNAJC5 | 0.746973 | 4 | 0 | 4 |
| TM9SF4 | SLC44A5 | 0.737133 | 3 | 0 | 3 |
| TM9SF4 | TLCD1 | 0.716747 | 4 | 0 | 3 |
| TM9SF4 | MARS2 | 0.70876 | 3 | 0 | 3 |
| TM9SF4 | STK31 | 0.67005 | 4 | 0 | 4 |
| TM9SF4 | TM7SF2 | 0.658568 | 3 | 0 | 3 |
| TM9SF4 | LRG1 | 0.650076 | 4 | 0 | 3 |
| TM9SF4 | GRAMD1C | 0.649232 | 3 | 0 | 3 |
| TM9SF4 | FGF6 | 0.646534 | 3 | 0 | 3 |
| TM9SF4 | BROX | 0.646052 | 3 | 0 | 3 |
| TM9SF4 | CNGA1 | 0.636452 | 3 | 0 | 3 |
| TM9SF4 | TJP3 | 0.635911 | 3 | 0 | 3 |
| TM9SF4 | ELF3 | 0.633723 | 3 | 0 | 3 |
| TM9SF4 | ZBTB42 | 0.629685 | 5 | 0 | 4 |
| TM9SF4 | CNTD2 | 0.628412 | 3 | 0 | 3 |
| TM9SF4 | DGAT2 | 0.62766 | 5 | 0 | 3 |
| TM9SF4 | SYNGR4 | 0.612724 | 4 | 0 | 4 |
| TM9SF4 | PTPN3 | 0.608398 | 7 | 0 | 6 |
| TM9SF4 | DAGLB | 0.608359 | 6 | 0 | 4 |
| TM9SF4 | FUT2 | 0.60756 | 3 | 0 | 3 |
For details and further investigation, click here
