TMEM176A

 

Full name: transmembrane protein 176A Alias Symbol: HCA112|MS4B1
Type: protein-coding gene Cytoband: 7q36.1
Entrez ID: 55365 HGNC ID: HGNC:24930 Ensembl Gene: ENSG00000002933 OMIM ID: 610334
Drug and gene relationship at DGIdb

 

Expression of TMEM176A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TMEM176A 55365 218345_at 0.0296 0.9826
GSE20347 TMEM176A 55365 218345_at 0.6887 0.0000
GSE23400 TMEM176A 55365 218345_at 0.2214 0.0127
GSE26886 TMEM176A 55365 218345_at 0.6406 0.1228
GSE29001 TMEM176A 55365 218345_at 0.2928 0.3009
GSE38129 TMEM176A 55365 218345_at 0.3119 0.3803
GSE45670 TMEM176A 55365 218345_at -0.3209 0.1950
GSE53622 TMEM176A 55365 81121 0.3005 0.0392
GSE53624 TMEM176A 55365 81121 0.3052 0.0542
GSE63941 TMEM176A 55365 218345_at -4.0917 0.0000
GSE77861 TMEM176A 55365 218345_at 0.3446 0.1082
GSE97050 TMEM176A 55365 A_23_P252082 0.8567 0.1205
SRP007169 TMEM176A 55365 RNAseq 2.3641 0.0003
SRP008496 TMEM176A 55365 RNAseq 1.7294 0.0001
SRP064894 TMEM176A 55365 RNAseq 0.5335 0.1827
SRP133303 TMEM176A 55365 RNAseq 0.5496 0.0409
SRP159526 TMEM176A 55365 RNAseq 0.3389 0.5082
SRP193095 TMEM176A 55365 RNAseq 0.8307 0.0844
SRP219564 TMEM176A 55365 RNAseq 0.9327 0.0733
TCGA TMEM176A 55365 RNAseq -0.2201 0.0611

Upregulated datasets: 2; Downregulated datasets: 1.  


 

Survival by TMEM176A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TMEM176A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TMEM176A 55365 2 4 24
GSE20123 TMEM176A 55365 2 4 24
GSE43470 TMEM176A 55365 2 5 36
GSE46452 TMEM176A 55365 7 2 50
GSE47630 TMEM176A 55365 5 9 26
GSE54993 TMEM176A 55365 3 3 64
GSE54994 TMEM176A 55365 5 8 40
GSE60625 TMEM176A 55365 0 0 11
GSE74703 TMEM176A 55365 2 4 30
GSE74704 TMEM176A 55365 1 4 15
TCGA TMEM176A 55365 26 26 44

Total number of gains: 55; Total number of losses: 69; Total Number of normals: 364.  


 

Somatic mutations of TMEM176A:

 

Generating mutation plots.

 

Highly correlated genes for TMEM176A:

 

Showing top 20/1069 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TMEM176AVCAM10.75765111011
TMEM176AC19orf380.754049303
TMEM176ACERKL0.74381303
TMEM176AICAM10.732711505
TMEM176AGPC60.729527605
TMEM176ADEGS10.727671303
TMEM176ASUCNR10.725805404
TMEM176AUNC5C0.72184505
TMEM176AKBTBD20.720608404
TMEM176AITGAM0.712231908
TMEM176ASH2B30.71010613012
TMEM176ALAPTM50.7078421009
TMEM176ATRPV20.70667812012
TMEM176APIK3R60.706054303
TMEM176AC1orf1620.704601807
TMEM176APLXNC10.7040251009
TMEM176ATNFRSF1B0.70282212011
TMEM176ATYROBP0.69984711010
TMEM176AGBGT10.699715606
TMEM176AST8SIA40.697043505

For details and further investigation, click here