| Full name: tetratricopeptide repeat and ankyrin repeat containing 1 | Alias Symbol: LBA1|KIAA0342 | ||
| Type: protein-coding gene | Cytoband: 3p22.2 | ||
| Entrez ID: 9881 | HGNC ID: HGNC:29011 | Ensembl Gene: ENSG00000168016 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TRANK1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRANK1 | 9881 | 213261_at | 0.2949 | 0.5873 | |
| GSE20347 | TRANK1 | 9881 | 213261_at | 0.2506 | 0.0531 | |
| GSE23400 | TRANK1 | 9881 | 213261_at | 0.3707 | 0.0000 | |
| GSE26886 | TRANK1 | 9881 | 213261_at | 0.3616 | 0.0440 | |
| GSE29001 | TRANK1 | 9881 | 213261_at | 0.0313 | 0.8873 | |
| GSE38129 | TRANK1 | 9881 | 213261_at | 0.1927 | 0.1747 | |
| GSE45670 | TRANK1 | 9881 | 213261_at | 0.2956 | 0.0750 | |
| GSE53622 | TRANK1 | 9881 | 12150 | 0.3622 | 0.0214 | |
| GSE53624 | TRANK1 | 9881 | 12150 | 0.3380 | 0.0260 | |
| GSE63941 | TRANK1 | 9881 | 213261_at | 0.1481 | 0.8038 | |
| GSE77861 | TRANK1 | 9881 | 213261_at | -0.0591 | 0.6988 | |
| GSE97050 | TRANK1 | A_21_P0012440 | 0.4363 | 0.2394 | ||
| SRP007169 | TRANK1 | 9881 | RNAseq | 1.8409 | 0.0004 | |
| SRP008496 | TRANK1 | 9881 | RNAseq | 1.7582 | 0.0000 | |
| SRP064894 | TRANK1 | 9881 | RNAseq | 0.7219 | 0.0047 | |
| SRP133303 | TRANK1 | 9881 | RNAseq | 0.4831 | 0.0053 | |
| SRP159526 | TRANK1 | 9881 | RNAseq | -0.2287 | 0.5452 | |
| SRP193095 | TRANK1 | 9881 | RNAseq | 0.0509 | 0.8568 | |
| SRP219564 | TRANK1 | 9881 | RNAseq | 0.3565 | 0.5149 | |
| TCGA | TRANK1 | 9881 | RNAseq | -0.0013 | 0.9878 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by TRANK1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRANK1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRANK1 | 9881 | 0 | 18 | 12 | |
| GSE20123 | TRANK1 | 9881 | 0 | 18 | 12 | |
| GSE43470 | TRANK1 | 9881 | 0 | 20 | 23 | |
| GSE46452 | TRANK1 | 9881 | 2 | 17 | 40 | |
| GSE47630 | TRANK1 | 9881 | 1 | 25 | 14 | |
| GSE54993 | TRANK1 | 9881 | 6 | 3 | 61 | |
| GSE54994 | TRANK1 | 9881 | 1 | 32 | 20 | |
| GSE60625 | TRANK1 | 9881 | 5 | 0 | 6 | |
| GSE74703 | TRANK1 | 9881 | 0 | 16 | 20 | |
| GSE74704 | TRANK1 | 9881 | 0 | 12 | 8 | |
| TCGA | TRANK1 | 9881 | 0 | 71 | 25 |
Total number of gains: 15; Total number of losses: 232; Total Number of normals: 241.
Somatic mutations of TRANK1:
Generating mutation plots.
Highly correlated genes for TRANK1:
Showing top 20/285 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRANK1 | TMEM150B | 0.703864 | 3 | 0 | 3 |
| TRANK1 | CCR5 | 0.679727 | 5 | 0 | 5 |
| TRANK1 | GTSE1 | 0.677039 | 3 | 0 | 3 |
| TRANK1 | CD4 | 0.66198 | 5 | 0 | 4 |
| TRANK1 | PIK3CG | 0.658092 | 4 | 0 | 4 |
| TRANK1 | DCSTAMP | 0.656761 | 3 | 0 | 3 |
| TRANK1 | NOP14 | 0.656563 | 3 | 0 | 3 |
| TRANK1 | CMTM7 | 0.655661 | 3 | 0 | 3 |
| TRANK1 | PCGF1 | 0.649783 | 3 | 0 | 3 |
| TRANK1 | PLXNC1 | 0.64976 | 6 | 0 | 5 |
| TRANK1 | LRRC25 | 0.644916 | 3 | 0 | 3 |
| TRANK1 | TMEM119 | 0.632215 | 4 | 0 | 3 |
| TRANK1 | SCN3B | 0.631337 | 3 | 0 | 3 |
| TRANK1 | CD27 | 0.630882 | 5 | 0 | 4 |
| TRANK1 | LAT | 0.629018 | 4 | 0 | 3 |
| TRANK1 | KLRD1 | 0.628657 | 5 | 0 | 4 |
| TRANK1 | IFITM1 | 0.627896 | 8 | 0 | 7 |
| TRANK1 | FPR3 | 0.627011 | 7 | 0 | 6 |
| TRANK1 | RNASE6 | 0.626395 | 4 | 0 | 3 |
| TRANK1 | ATG2A | 0.62379 | 3 | 0 | 3 |
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