CCR5

 

Full name: C-C motif chemokine receptor 5 (gene/pseudogene) Alias Symbol: CKR-5|CC-CKR-5|CKR5|CD195|IDDM22
Type: protein-coding gene Cytoband: 3p21.31
Entrez ID: 1234 HGNC ID: HGNC:1606 Ensembl Gene: ENSG00000160791 OMIM ID: 601373
Drug and gene relationship at DGIdb

 

CCR5 involved pathways:

KEGG pathway Description View
hsa04062Chemokine signaling pathway
hsa05145Toxoplasmosis

 

Expression of CCR5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCR5 1234 206991_s_at 0.5336 0.3799
GSE20347 CCR5 1234 206991_s_at 0.2568 0.0870
GSE23400 CCR5 1234 206991_s_at 0.0680 0.1895
GSE26886 CCR5 1234 206991_s_at -0.8823 0.0103
GSE29001 CCR5 1234 206991_s_at 0.1290 0.5601
GSE38129 CCR5 1234 206991_s_at 0.1957 0.2366
GSE45670 CCR5 1234 206991_s_at 0.0566 0.8656
GSE53622 CCR5 1234 62648 -0.9975 0.0000
GSE53624 CCR5 1234 24244 -0.0418 0.8286
GSE63941 CCR5 1234 206991_s_at 0.2708 0.1161
GSE77861 CCR5 1234 206991_s_at -0.0257 0.8502
GSE97050 CCR5 1234 A_23_P412321 0.5548 0.2463
SRP064894 CCR5 1234 RNAseq 0.3895 0.2208
SRP133303 CCR5 1234 RNAseq 0.0347 0.8979
SRP159526 CCR5 1234 RNAseq -0.5650 0.5388
SRP193095 CCR5 1234 RNAseq -0.4080 0.0348
SRP219564 CCR5 1234 RNAseq 0.9868 0.0722
TCGA CCR5 1234 RNAseq 0.1723 0.4256

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCR5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCR5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCR5 1234 0 17 13
GSE20123 CCR5 1234 0 18 12
GSE43470 CCR5 1234 0 20 23
GSE46452 CCR5 1234 2 17 40
GSE47630 CCR5 1234 2 23 15
GSE54993 CCR5 1234 7 2 61
GSE54994 CCR5 1234 0 36 17
GSE60625 CCR5 1234 5 0 6
GSE74703 CCR5 1234 0 15 21
GSE74704 CCR5 1234 0 12 8
TCGA CCR5 1234 1 75 20

Total number of gains: 17; Total number of losses: 235; Total Number of normals: 236.  


 

Somatic mutations of CCR5:

 

Generating mutation plots.

 

Highly correlated genes for CCR5:

 

Showing top 20/310 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCR5SNX200.768984505
CCR5SAMD30.75164505
CCR5SLA0.74892210010
CCR5HLA-DOA0.744906303
CCR5IL2RB0.737482907
CCR5IL10RA0.726144807
CCR5CD530.716565908
CCR5GPRIN30.714942404
CCR5CCR10.711016909
CCR5SASH30.70579911010
CCR5PTPN70.705638908
CCR5CYTH40.6997808
CCR5MRC10.698889303
CCR5FCGR1B0.698166606
CCR5LCK0.696061908
CCR5NKG70.694783908
CCR5IRF80.694411909
CCR5CYTIP0.6933891009
CCR5TLR80.690863404
CCR5PRF10.689594909

For details and further investigation, click here