Full name: C-C motif chemokine receptor 5 (gene/pseudogene) | Alias Symbol: CKR-5|CC-CKR-5|CKR5|CD195|IDDM22 | ||
Type: protein-coding gene | Cytoband: 3p21.31 | ||
Entrez ID: 1234 | HGNC ID: HGNC:1606 | Ensembl Gene: ENSG00000160791 | OMIM ID: 601373 |
Drug and gene relationship at DGIdb |
CCR5 involved pathways:
KEGG pathway | Description | View |
---|---|---|
hsa04062 | Chemokine signaling pathway | |
hsa05145 | Toxoplasmosis |
Expression of CCR5:
Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
---|---|---|---|---|---|---|
GSE17351 | CCR5 | 1234 | 206991_s_at | 0.5336 | 0.3799 | |
GSE20347 | CCR5 | 1234 | 206991_s_at | 0.2568 | 0.0870 | |
GSE23400 | CCR5 | 1234 | 206991_s_at | 0.0680 | 0.1895 | |
GSE26886 | CCR5 | 1234 | 206991_s_at | -0.8823 | 0.0103 | |
GSE29001 | CCR5 | 1234 | 206991_s_at | 0.1290 | 0.5601 | |
GSE38129 | CCR5 | 1234 | 206991_s_at | 0.1957 | 0.2366 | |
GSE45670 | CCR5 | 1234 | 206991_s_at | 0.0566 | 0.8656 | |
GSE53622 | CCR5 | 1234 | 62648 | -0.9975 | 0.0000 | |
GSE53624 | CCR5 | 1234 | 24244 | -0.0418 | 0.8286 | |
GSE63941 | CCR5 | 1234 | 206991_s_at | 0.2708 | 0.1161 | |
GSE77861 | CCR5 | 1234 | 206991_s_at | -0.0257 | 0.8502 | |
GSE97050 | CCR5 | 1234 | A_23_P412321 | 0.5548 | 0.2463 | |
SRP064894 | CCR5 | 1234 | RNAseq | 0.3895 | 0.2208 | |
SRP133303 | CCR5 | 1234 | RNAseq | 0.0347 | 0.8979 | |
SRP159526 | CCR5 | 1234 | RNAseq | -0.5650 | 0.5388 | |
SRP193095 | CCR5 | 1234 | RNAseq | -0.4080 | 0.0348 | |
SRP219564 | CCR5 | 1234 | RNAseq | 0.9868 | 0.0722 | |
TCGA | CCR5 | 1234 | RNAseq | 0.1723 | 0.4256 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CCR5 expression:
Note: Click image to view full size file.
Copy number change of CCR5:
Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
---|---|---|---|---|---|---|
GSE15526 | CCR5 | 1234 | 0 | 17 | 13 | |
GSE20123 | CCR5 | 1234 | 0 | 18 | 12 | |
GSE43470 | CCR5 | 1234 | 0 | 20 | 23 | |
GSE46452 | CCR5 | 1234 | 2 | 17 | 40 | |
GSE47630 | CCR5 | 1234 | 2 | 23 | 15 | |
GSE54993 | CCR5 | 1234 | 7 | 2 | 61 | |
GSE54994 | CCR5 | 1234 | 0 | 36 | 17 | |
GSE60625 | CCR5 | 1234 | 5 | 0 | 6 | |
GSE74703 | CCR5 | 1234 | 0 | 15 | 21 | |
GSE74704 | CCR5 | 1234 | 0 | 12 | 8 | |
TCGA | CCR5 | 1234 | 1 | 75 | 20 |
Total number of gains: 17; Total number of losses: 235; Total Number of normals: 236.
Somatic mutations of CCR5:
Generating mutation plots.
Highly correlated genes for CCR5:
Showing top 20/310 corelated genes with mean PCC>0.5.
Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
---|---|---|---|---|---|
CCR5 | SNX20 | 0.768984 | 5 | 0 | 5 |
CCR5 | SAMD3 | 0.75164 | 5 | 0 | 5 |
CCR5 | SLA | 0.748922 | 10 | 0 | 10 |
CCR5 | HLA-DOA | 0.744906 | 3 | 0 | 3 |
CCR5 | IL2RB | 0.737482 | 9 | 0 | 7 |
CCR5 | IL10RA | 0.726144 | 8 | 0 | 7 |
CCR5 | CD53 | 0.716565 | 9 | 0 | 8 |
CCR5 | GPRIN3 | 0.714942 | 4 | 0 | 4 |
CCR5 | CCR1 | 0.711016 | 9 | 0 | 9 |
CCR5 | SASH3 | 0.705799 | 11 | 0 | 10 |
CCR5 | PTPN7 | 0.705638 | 9 | 0 | 8 |
CCR5 | CYTH4 | 0.6997 | 8 | 0 | 8 |
CCR5 | MRC1 | 0.698889 | 3 | 0 | 3 |
CCR5 | FCGR1B | 0.698166 | 6 | 0 | 6 |
CCR5 | LCK | 0.696061 | 9 | 0 | 8 |
CCR5 | NKG7 | 0.694783 | 9 | 0 | 8 |
CCR5 | IRF8 | 0.694411 | 9 | 0 | 9 |
CCR5 | CYTIP | 0.693389 | 10 | 0 | 9 |
CCR5 | TLR8 | 0.690863 | 4 | 0 | 4 |
CCR5 | PRF1 | 0.689594 | 9 | 0 | 9 |
For details and further investigation, click here