| Full name: tripartite motif containing 29 | Alias Symbol: ATDC|FLJ36085 | ||
| Type: protein-coding gene | Cytoband: 11q23.3 | ||
| Entrez ID: 23650 | HGNC ID: HGNC:17274 | Ensembl Gene: ENSG00000137699 | OMIM ID: 610658 |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM29:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM29 | 23650 | 202504_at | -0.3987 | 0.4241 | |
| GSE20347 | TRIM29 | 23650 | 202504_at | -1.2678 | 0.0000 | |
| GSE23400 | TRIM29 | 23650 | 202504_at | -0.7691 | 0.0000 | |
| GSE26886 | TRIM29 | 23650 | 202504_at | -1.7598 | 0.0000 | |
| GSE29001 | TRIM29 | 23650 | 202504_at | -1.4125 | 0.0021 | |
| GSE38129 | TRIM29 | 23650 | 202504_at | -0.0495 | 0.9535 | |
| GSE45670 | TRIM29 | 23650 | 202504_at | -0.3914 | 0.0725 | |
| GSE53622 | TRIM29 | 23650 | 122063 | -0.8851 | 0.0078 | |
| GSE53624 | TRIM29 | 23650 | 122063 | -1.4964 | 0.0000 | |
| GSE63941 | TRIM29 | 23650 | 202504_at | 4.4149 | 0.0018 | |
| GSE77861 | TRIM29 | 23650 | 202504_at | -0.3639 | 0.1141 | |
| GSE97050 | TRIM29 | 23650 | A_23_P203267 | 0.5426 | 0.7514 | |
| SRP007169 | TRIM29 | 23650 | RNAseq | -2.2250 | 0.0000 | |
| SRP008496 | TRIM29 | 23650 | RNAseq | -2.2172 | 0.0000 | |
| SRP064894 | TRIM29 | 23650 | RNAseq | -2.1411 | 0.0000 | |
| SRP133303 | TRIM29 | 23650 | RNAseq | -1.7468 | 0.0000 | |
| SRP159526 | TRIM29 | 23650 | RNAseq | -2.0730 | 0.0000 | |
| SRP219564 | TRIM29 | 23650 | RNAseq | -1.5186 | 0.2202 | |
| TCGA | TRIM29 | 23650 | RNAseq | 1.1617 | 0.0000 |
Upregulated datasets: 2; Downregulated datasets: 9.
Survival by TRIM29 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRIM29:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM29 | 23650 | 1 | 12 | 17 | |
| GSE20123 | TRIM29 | 23650 | 1 | 12 | 17 | |
| GSE43470 | TRIM29 | 23650 | 2 | 8 | 33 | |
| GSE46452 | TRIM29 | 23650 | 3 | 26 | 30 | |
| GSE47630 | TRIM29 | 23650 | 2 | 19 | 19 | |
| GSE54993 | TRIM29 | 23650 | 10 | 0 | 60 | |
| GSE54994 | TRIM29 | 23650 | 5 | 19 | 29 | |
| GSE60625 | TRIM29 | 23650 | 0 | 3 | 8 | |
| GSE74703 | TRIM29 | 23650 | 1 | 5 | 30 | |
| GSE74704 | TRIM29 | 23650 | 0 | 8 | 12 | |
| TCGA | TRIM29 | 23650 | 5 | 50 | 41 |
Total number of gains: 30; Total number of losses: 162; Total Number of normals: 296.
Somatic mutations of TRIM29:
Generating mutation plots.
Highly correlated genes for TRIM29:
Showing top 20/1150 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM29 | S100A16 | 0.815423 | 8 | 0 | 8 |
| TRIM29 | PITX1 | 0.801333 | 11 | 0 | 11 |
| TRIM29 | RAB25 | 0.779713 | 12 | 0 | 12 |
| TRIM29 | PKP3 | 0.77892 | 12 | 0 | 12 |
| TRIM29 | EPHA1 | 0.777372 | 13 | 0 | 12 |
| TRIM29 | EVPL | 0.777209 | 13 | 0 | 12 |
| TRIM29 | ACPP | 0.763119 | 11 | 0 | 11 |
| TRIM29 | ULK3 | 0.762589 | 6 | 0 | 6 |
| TRIM29 | ARHGAP32 | 0.758491 | 11 | 0 | 10 |
| TRIM29 | MALL | 0.757904 | 12 | 0 | 11 |
| TRIM29 | CRABP2 | 0.756769 | 10 | 0 | 10 |
| TRIM29 | MAB21L3 | 0.756707 | 5 | 0 | 5 |
| TRIM29 | DUOX1 | 0.754864 | 13 | 0 | 12 |
| TRIM29 | C6orf132 | 0.754542 | 8 | 0 | 8 |
| TRIM29 | EPS8L2 | 0.752366 | 11 | 0 | 11 |
| TRIM29 | TMPRSS11A | 0.751469 | 3 | 0 | 3 |
| TRIM29 | KRT6C | 0.750585 | 4 | 0 | 4 |
| TRIM29 | SMAGP | 0.749839 | 11 | 0 | 10 |
| TRIM29 | TECR | 0.747505 | 12 | 0 | 12 |
| TRIM29 | MAL2 | 0.747119 | 8 | 0 | 7 |
For details and further investigation, click here
