TSC22D4

 

Full name: TSC22 domain family member 4 Alias Symbol: THG-1|TILZ2
Type: protein-coding gene Cytoband: 7q22.1
Entrez ID: 81628 HGNC ID: HGNC:21696 Ensembl Gene: ENSG00000166925 OMIM ID: 611914
Drug and gene relationship at DGIdb

 

Expression of TSC22D4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TSC22D4 81628 208104_s_at 0.0145 0.9799
GSE20347 TSC22D4 81628 208104_s_at -0.2969 0.0037
GSE23400 TSC22D4 81628 208104_s_at -0.2647 0.0000
GSE26886 TSC22D4 81628 208104_s_at 0.1741 0.1918
GSE29001 TSC22D4 81628 208104_s_at -0.3177 0.0338
GSE38129 TSC22D4 81628 208104_s_at -0.3539 0.0006
GSE45670 TSC22D4 81628 208104_s_at -0.1643 0.1776
GSE53622 TSC22D4 81628 83415 -0.6267 0.0000
GSE53624 TSC22D4 81628 83415 -0.5687 0.0000
GSE63941 TSC22D4 81628 208104_s_at -0.0293 0.9082
GSE77861 TSC22D4 81628 208104_s_at -0.2000 0.3570
GSE97050 TSC22D4 81628 A_24_P200942 0.0018 0.9971
SRP007169 TSC22D4 81628 RNAseq -2.7044 0.0000
SRP008496 TSC22D4 81628 RNAseq -2.5686 0.0000
SRP064894 TSC22D4 81628 RNAseq -0.7610 0.0049
SRP133303 TSC22D4 81628 RNAseq -0.6703 0.0000
SRP159526 TSC22D4 81628 RNAseq -1.0474 0.0001
SRP193095 TSC22D4 81628 RNAseq -0.5830 0.0008
SRP219564 TSC22D4 81628 RNAseq -0.6615 0.0616
TCGA TSC22D4 81628 RNAseq 0.0732 0.1729

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by TSC22D4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TSC22D4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TSC22D4 81628 13 0 17
GSE20123 TSC22D4 81628 13 0 17
GSE43470 TSC22D4 81628 7 2 34
GSE46452 TSC22D4 81628 11 1 47
GSE47630 TSC22D4 81628 7 3 30
GSE54993 TSC22D4 81628 1 9 60
GSE54994 TSC22D4 81628 16 3 34
GSE60625 TSC22D4 81628 0 0 11
GSE74703 TSC22D4 81628 7 1 28
GSE74704 TSC22D4 81628 9 0 11
TCGA TSC22D4 81628 52 6 38

Total number of gains: 136; Total number of losses: 25; Total Number of normals: 327.  


 

Somatic mutations of TSC22D4:

 

Generating mutation plots.

 

Highly correlated genes for TSC22D4:

 

Showing top 20/1035 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TSC22D4CRIP30.742536303
TSC22D4RIPK30.738441303
TSC22D4NIPAL10.729388303
TSC22D4DDI20.723337303
TSC22D4FAM166A0.71978303
TSC22D4ABHD120.718476303
TSC22D4SRP680.718263404
TSC22D4MZF10.713626303
TSC22D4RNF2070.709294303
TSC22D4ZNF4160.698324303
TSC22D4KLK140.696168303
TSC22D4MOSPD30.69385811010
TSC22D4AHSP0.693595403
TSC22D4LTA4H0.692006303
TSC22D4ITGA80.687499403
TSC22D4DTX20.686027707
TSC22D4NUAK20.682789303
TSC22D4SESN20.6827404
TSC22D4KLF160.680665403
TSC22D4TMEM120A0.675303606

For details and further investigation, click here