ZNF598

 

Full name: zinc finger protein 598 Alias Symbol: FLJ00086|HEL2
Type: protein-coding gene Cytoband: 16p13.3
Entrez ID: 90850 HGNC ID: HGNC:28079 Ensembl Gene: ENSG00000167962 OMIM ID: 617508
Drug and gene relationship at DGIdb

 

Expression of ZNF598:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZNF598 90850 225104_at 0.7306 0.1116
GSE26886 ZNF598 90850 232367_x_at -0.2761 0.2005
GSE45670 ZNF598 90850 225104_at 0.8167 0.0000
GSE53622 ZNF598 90850 147548 0.7292 0.0000
GSE53624 ZNF598 90850 147548 0.6910 0.0000
GSE63941 ZNF598 90850 225104_at 0.3790 0.2249
GSE77861 ZNF598 90850 232367_x_at 0.0126 0.9528
GSE97050 ZNF598 90850 A_23_P407684 0.7626 0.1113
SRP007169 ZNF598 90850 RNAseq 0.0328 0.9396
SRP008496 ZNF598 90850 RNAseq 0.0509 0.8521
SRP064894 ZNF598 90850 RNAseq 0.3703 0.0823
SRP133303 ZNF598 90850 RNAseq 0.7408 0.0000
SRP159526 ZNF598 90850 RNAseq 0.3814 0.2276
SRP193095 ZNF598 90850 RNAseq 0.7977 0.0000
SRP219564 ZNF598 90850 RNAseq 0.7213 0.1568
TCGA ZNF598 90850 RNAseq 0.1802 0.0002

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZNF598 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZNF598:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZNF598 90850 5 5 20
GSE20123 ZNF598 90850 5 4 21
GSE43470 ZNF598 90850 4 7 32
GSE46452 ZNF598 90850 38 1 20
GSE47630 ZNF598 90850 13 6 21
GSE54993 ZNF598 90850 3 5 62
GSE54994 ZNF598 90850 5 9 39
GSE60625 ZNF598 90850 4 0 7
GSE74703 ZNF598 90850 4 5 27
GSE74704 ZNF598 90850 3 2 15
TCGA ZNF598 90850 19 14 63

Total number of gains: 103; Total number of losses: 58; Total Number of normals: 327.  


 

Somatic mutations of ZNF598:

 

Generating mutation plots.

 

Highly correlated genes for ZNF598:

 

Showing top 20/561 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZNF598PGP0.765698303
ZNF598PSMC3IP0.751752303
ZNF598NTMT10.751252303
ZNF598CD2760.750222303
ZNF598DNAJA30.74321404
ZNF598CDCA30.738447303
ZNF598PHLDA30.737667303
ZNF598ACOT70.734146404
ZNF598POC1A0.726821303
ZNF598CDC60.723925303
ZNF598TXNDC120.722607404
ZNF598RUVBL10.716347404
ZNF598ORC10.716105303
ZNF598THOC60.713746303
ZNF598APCS0.710532404
ZNF598GPBAR10.710477303
ZNF598DCTPP10.709484404
ZNF598OGFOD20.704054404
ZNF598CDCA80.703357504
ZNF598C19orf480.70301303

For details and further investigation, click here