| Full name: ASAP1 intronic transcript 2 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 8q24.21 | ||
| Entrez ID: 100507117 | HGNC ID: HGNC:48917 | Ensembl Gene: ENSG00000280543 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ASAP1-IT2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ASAP1-IT2 | 100507117 | 1557685_at | 0.5830 | 0.4403 | |
| GSE26886 | ASAP1-IT2 | 100507117 | 1557685_at | 0.5632 | 0.0010 | |
| GSE45670 | ASAP1-IT2 | 100507117 | 1557685_at | 0.2249 | 0.3113 | |
| GSE63941 | ASAP1-IT2 | 100507117 | 1557685_at | -1.6269 | 0.0002 | |
| GSE77861 | ASAP1-IT2 | 100507117 | 1557685_at | 0.1990 | 0.0673 | |
| SRP133303 | ASAP1-IT2 | 100507117 | RNAseq | 0.2124 | 0.2890 | |
| SRP193095 | ASAP1-IT2 | 100507117 | RNAseq | 0.5861 | 0.0007 | |
| SRP219564 | ASAP1-IT2 | 100507117 | RNAseq | 0.2733 | 0.6063 |
Upregulated datasets: 0; Downregulated datasets: 1.
Copy number change of ASAP1-IT2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ASAP1-IT2 | 100507117 | 17 | 0 | 13 | |
| GSE20123 | ASAP1-IT2 | 100507117 | 17 | 0 | 13 | |
| GSE43470 | ASAP1-IT2 | 100507117 | 21 | 1 | 21 | |
| GSE46452 | ASAP1-IT2 | 100507117 | 27 | 0 | 32 | |
| GSE47630 | ASAP1-IT2 | 100507117 | 24 | 0 | 16 | |
| GSE54993 | ASAP1-IT2 | 100507117 | 0 | 24 | 46 | |
| GSE54994 | ASAP1-IT2 | 100507117 | 39 | 1 | 13 | |
| GSE60625 | ASAP1-IT2 | 100507117 | 0 | 7 | 4 | |
| GSE74703 | ASAP1-IT2 | 100507117 | 18 | 1 | 17 | |
| GSE74704 | ASAP1-IT2 | 100507117 | 11 | 0 | 9 |
Total number of gains: 174; Total number of losses: 34; Total Number of normals: 184.
Somatic mutations of ASAP1-IT2:
Generating mutation plots.
Highly correlated genes for ASAP1-IT2:
Showing top 20/236 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ASAP1-IT2 | ASNSD1 | 0.737931 | 3 | 0 | 3 |
| ASAP1-IT2 | COL1A2 | 0.724845 | 4 | 0 | 4 |
| ASAP1-IT2 | FAM160B2 | 0.713142 | 3 | 0 | 3 |
| ASAP1-IT2 | COL3A1 | 0.703703 | 4 | 0 | 4 |
| ASAP1-IT2 | ASAP1 | 0.70145 | 5 | 0 | 4 |
| ASAP1-IT2 | COL1A1 | 0.696364 | 4 | 0 | 4 |
| ASAP1-IT2 | COL6A3 | 0.694484 | 4 | 0 | 4 |
| ASAP1-IT2 | ASAP1-IT1 | 0.686562 | 4 | 0 | 3 |
| ASAP1-IT2 | CDH11 | 0.68355 | 4 | 0 | 4 |
| ASAP1-IT2 | EXT1 | 0.68131 | 5 | 0 | 5 |
| ASAP1-IT2 | TNFAIP6 | 0.68058 | 4 | 0 | 3 |
| ASAP1-IT2 | VCAN | 0.677462 | 4 | 0 | 4 |
| ASAP1-IT2 | POSTN | 0.67275 | 4 | 0 | 4 |
| ASAP1-IT2 | HSPH1 | 0.670383 | 3 | 0 | 3 |
| ASAP1-IT2 | THY1 | 0.669967 | 4 | 0 | 3 |
| ASAP1-IT2 | SLC39A13 | 0.666651 | 4 | 0 | 3 |
| ASAP1-IT2 | ABL2 | 0.662553 | 5 | 0 | 5 |
| ASAP1-IT2 | TCOF1 | 0.661045 | 4 | 0 | 3 |
| ASAP1-IT2 | WDR75 | 0.658908 | 3 | 0 | 3 |
| ASAP1-IT2 | TBX2 | 0.658375 | 3 | 0 | 3 |
For details and further investigation, click here
