BMP2

 

Full name: bone morphogenetic protein 2 Alias Symbol: 
Type: protein-coding gene Cytoband: 20p12.3
Entrez ID: 650 HGNC ID: HGNC:1069 Ensembl Gene: ENSG00000125845 OMIM ID: 112261
Drug and gene relationship at DGIdb

 

BMP2 involved pathways:

KEGG pathway Description View
hsa04350TGF-beta signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa05200Pathways in cancer
hsa05217Basal cell carcinoma

 

Expression of BMP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 BMP2 650 205290_s_at -0.1610 0.9284
GSE20347 BMP2 650 205290_s_at 0.2555 0.6695
GSE23400 BMP2 650 205290_s_at 0.2591 0.1338
GSE26886 BMP2 650 205290_s_at 2.0663 0.0004
GSE29001 BMP2 650 205290_s_at -0.8442 0.1063
GSE38129 BMP2 650 205290_s_at 0.1138 0.7983
GSE45670 BMP2 650 205290_s_at 0.9451 0.1464
GSE53622 BMP2 650 32823 -0.0144 0.9504
GSE53624 BMP2 650 32823 -0.1935 0.2779
GSE63941 BMP2 650 205289_at -2.4976 0.0160
GSE77861 BMP2 650 205290_s_at 1.5182 0.0324
GSE97050 BMP2 650 A_33_P3237150 0.4286 0.2727
SRP007169 BMP2 650 RNAseq -1.0793 0.0470
SRP008496 BMP2 650 RNAseq -0.5294 0.2525
SRP064894 BMP2 650 RNAseq 0.6181 0.1325
SRP133303 BMP2 650 RNAseq 0.6685 0.0660
SRP159526 BMP2 650 RNAseq 0.8236 0.0327
SRP193095 BMP2 650 RNAseq 0.8055 0.0298
SRP219564 BMP2 650 RNAseq 0.3865 0.4851
TCGA BMP2 650 RNAseq -0.2264 0.1612

Upregulated datasets: 2; Downregulated datasets: 2.  


 

Survival by BMP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of BMP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 BMP2 650 11 1 18
GSE20123 BMP2 650 11 1 18
GSE43470 BMP2 650 12 1 30
GSE46452 BMP2 650 26 1 32
GSE47630 BMP2 650 18 4 18
GSE54993 BMP2 650 1 14 55
GSE54994 BMP2 650 25 2 26
GSE60625 BMP2 650 0 0 11
GSE74703 BMP2 650 9 1 26
GSE74704 BMP2 650 5 1 14
TCGA BMP2 650 40 11 45

Total number of gains: 158; Total number of losses: 37; Total Number of normals: 293.  


 

Somatic mutations of BMP2:

 

Generating mutation plots.

 

Highly correlated genes for BMP2:

 

Showing top 20/576 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
BMP2TMEM2230.786832303
BMP2MRGBP0.751592303
BMP2MRPS260.751485303
BMP2LRRC8A0.751186303
BMP2MRPL550.741609303
BMP2CHML0.73851303
BMP2YWHAG0.737415303
BMP2ZNF8270.73411303
BMP2NEK60.726581303
BMP2AGRN0.724633404
BMP2MOGS0.72447303
BMP2CCT20.722239303
BMP2MAPKAPK50.721645303
BMP2TCTN30.721428303
BMP2EXOSC60.721098303
BMP2LRRC420.716796303
BMP2SVEP10.716153303
BMP2CBX10.71595303
BMP2FJX10.714062505
BMP2SMARCAL10.713813303

For details and further investigation, click here