FANCG

 

Full name: FA complementation group G Alias Symbol: FAG
Type: protein-coding gene Cytoband: 9p13.3
Entrez ID: 2189 HGNC ID: HGNC:3588 Ensembl Gene: ENSG00000221829 OMIM ID: 602956
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

FANCG involved pathways:

KEGG pathway Description View
hsa03460Fanconi anemia pathway

 

Expression of FANCG:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FANCG 2189 203564_at 0.6967 0.0559
GSE20347 FANCG 2189 203564_at 0.5318 0.0043
GSE23400 FANCG 2189 203564_at 0.6726 0.0000
GSE26886 FANCG 2189 203564_at 0.6592 0.0150
GSE29001 FANCG 2189 203564_at 0.7378 0.0024
GSE38129 FANCG 2189 203564_at 0.7488 0.0000
GSE45670 FANCG 2189 203564_at 0.5979 0.0017
GSE53622 FANCG 2189 96258 0.7733 0.0000
GSE53624 FANCG 2189 96258 0.9747 0.0000
GSE63941 FANCG 2189 203564_at 1.9813 0.0007
GSE77861 FANCG 2189 203564_at 0.4160 0.2571
GSE97050 FANCG 2189 A_23_P71644 0.6974 0.1496
SRP007169 FANCG 2189 RNAseq 0.7940 0.1007
SRP008496 FANCG 2189 RNAseq 1.0589 0.0041
SRP064894 FANCG 2189 RNAseq 1.0732 0.0000
SRP133303 FANCG 2189 RNAseq 0.5097 0.0028
SRP159526 FANCG 2189 RNAseq 0.3990 0.1324
SRP193095 FANCG 2189 RNAseq 0.3745 0.0029
SRP219564 FANCG 2189 RNAseq 1.2931 0.0055
TCGA FANCG 2189 RNAseq 0.4221 0.0000

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by FANCG expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FANCG:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FANCG 2189 3 13 14
GSE20123 FANCG 2189 3 13 14
GSE43470 FANCG 2189 3 10 30
GSE46452 FANCG 2189 6 15 38
GSE47630 FANCG 2189 1 20 19
GSE54993 FANCG 2189 6 0 64
GSE54994 FANCG 2189 6 12 35
GSE60625 FANCG 2189 0 0 11
GSE74703 FANCG 2189 2 7 27
GSE74704 FANCG 2189 0 11 9
TCGA FANCG 2189 16 44 36

Total number of gains: 46; Total number of losses: 145; Total Number of normals: 297.  


 

Somatic mutations of FANCG:

 

Generating mutation plots.

 

Highly correlated genes for FANCG:

 

Showing top 20/919 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FANCGZWINT0.76938710010
FANCGBOP10.765435303
FANCGBUB1B0.751167908
FANCGSPC250.72927411011
FANCGMND10.727203505
FANCGKIF18B0.72577311010
FANCGC19orf480.725639303
FANCGKIF4A0.72150612011
FANCGMELK0.71471712010
FANCGMCM20.71166411010
FANCGMTFR20.709834606
FANCGTIMELESS0.7086941109
FANCGCDC70.70780511011
FANCGMCM80.705639606
FANCGGINS10.70317711010
FANCGE2F70.699825707
FANCGGMNN0.69928811010
FANCGTRIP130.69786211011
FANCGMCM100.696811009
FANCGPRKDC0.696305707

For details and further investigation, click here