C5orf15

 

Full name: chromosome 5 open reading frame 15 Alias Symbol: KCT2|HTGN29
Type: protein-coding gene Cytoband: 5q31.1
Entrez ID: 56951 HGNC ID: HGNC:20656 Ensembl Gene: ENSG00000113583 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C5orf15:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C5orf15 56951 203024_s_at 0.1939 0.7147
GSE20347 C5orf15 56951 203024_s_at 0.5017 0.0017
GSE23400 C5orf15 56951 203024_s_at 0.7802 0.0000
GSE26886 C5orf15 56951 203024_s_at 0.7577 0.0009
GSE29001 C5orf15 56951 203024_s_at 0.8547 0.0020
GSE38129 C5orf15 56951 203024_s_at 0.6313 0.0000
GSE45670 C5orf15 56951 203024_s_at 0.3702 0.0202
GSE53622 C5orf15 56951 57035 0.6061 0.0000
GSE53624 C5orf15 56951 57035 0.7328 0.0000
GSE63941 C5orf15 56951 203024_s_at -1.1496 0.0038
GSE77861 C5orf15 56951 203024_s_at 0.3995 0.0663
GSE97050 C5orf15 56951 A_23_P81650 0.7242 0.1403
SRP007169 C5orf15 56951 RNAseq 1.1918 0.0040
SRP008496 C5orf15 56951 RNAseq 1.1730 0.0001
SRP064894 C5orf15 56951 RNAseq 0.8307 0.0000
SRP133303 C5orf15 56951 RNAseq 1.0732 0.0001
SRP159526 C5orf15 56951 RNAseq 0.6197 0.0918
SRP193095 C5orf15 56951 RNAseq 0.0971 0.5145
SRP219564 C5orf15 56951 RNAseq 0.8099 0.0506
TCGA C5orf15 56951 RNAseq 0.1209 0.0251

Upregulated datasets: 3; Downregulated datasets: 1.  

 

Survival by C5orf15 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of C5orf15:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C5orf15 56951 2 11 17
GSE20123 C5orf15 56951 3 11 16
GSE43470 C5orf15 56951 2 9 32
GSE46452 C5orf15 56951 0 27 32
GSE47630 C5orf15 56951 0 21 19
GSE54993 C5orf15 56951 9 1 60
GSE54994 C5orf15 56951 2 14 37
GSE60625 C5orf15 56951 0 0 11
GSE74703 C5orf15 56951 2 6 28
GSE74704 C5orf15 56951 2 5 13
TCGA C5orf15 56951 3 37 56

Total number of gains: 25; Total number of losses: 142; Total Number of normals: 321.  

 

Somatic mutations of C5orf15:

 

Generating mutation plots.

 

Highly correlated genes for C5orf15:

 

Showing top 20/1211 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C5orf15RNF1450.814784303
C5orf15ATOX10.77447303
C5orf15GFM20.772337303
C5orf15PREX10.756465303
C5orf15THEM40.741456303
C5orf15SPON20.728876303
C5orf15FCGR3A0.725334303
C5orf15MMS22L0.72257303
C5orf15SLC35B20.714141303
C5orf15UCK20.706766303
C5orf15AP3D10.701204303
C5orf15C12orf650.7001404
C5orf15HGF0.698596303
C5orf15CCDC1270.697908303
C5orf15PDIA50.696137303
C5orf15PPHLN10.695755403
C5orf15TNFRSF210.695583404
C5orf15PDIA60.69516310010
C5orf15TRIM470.695059303
C5orf15VSTM40.691665303

For details and further investigation, click here