| Full name: chromosome 9 open reading frame 85 | Alias Symbol: MGC61599 | ||
| Type: protein-coding gene | Cytoband: 9q21.13 | ||
| Entrez ID: 138241 | HGNC ID: HGNC:28784 | Ensembl Gene: ENSG00000155621 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C9orf85:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C9orf85 | 138241 | 238912_x_at | -0.5186 | 0.2503 | |
| GSE26886 | C9orf85 | 138241 | 238912_x_at | -0.3893 | 0.0970 | |
| GSE45670 | C9orf85 | 138241 | 238912_x_at | -0.0577 | 0.7916 | |
| GSE53622 | C9orf85 | 138241 | 116962 | -0.2493 | 0.0008 | |
| GSE53624 | C9orf85 | 138241 | 116962 | -0.3606 | 0.0000 | |
| GSE63941 | C9orf85 | 138241 | 238912_x_at | 0.7166 | 0.0757 | |
| GSE77861 | C9orf85 | 138241 | 238912_x_at | -0.2247 | 0.5451 | |
| GSE97050 | C9orf85 | 138241 | A_33_P3409506 | -0.3363 | 0.2332 | |
| SRP007169 | C9orf85 | 138241 | RNAseq | -0.8520 | 0.0920 | |
| SRP008496 | C9orf85 | 138241 | RNAseq | -0.7652 | 0.0437 | |
| SRP064894 | C9orf85 | 138241 | RNAseq | -0.4064 | 0.0170 | |
| SRP133303 | C9orf85 | 138241 | RNAseq | -0.2979 | 0.0718 | |
| SRP159526 | C9orf85 | 138241 | RNAseq | -0.8382 | 0.0165 | |
| SRP193095 | C9orf85 | 138241 | RNAseq | -0.7409 | 0.0000 | |
| SRP219564 | C9orf85 | 138241 | RNAseq | -0.6863 | 0.1110 | |
| TCGA | C9orf85 | 138241 | RNAseq | 0.1092 | 0.1472 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by C9orf85 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C9orf85:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C9orf85 | 138241 | 6 | 11 | 13 | |
| GSE20123 | C9orf85 | 138241 | 6 | 11 | 13 | |
| GSE43470 | C9orf85 | 138241 | 6 | 5 | 32 | |
| GSE46452 | C9orf85 | 138241 | 6 | 14 | 39 | |
| GSE47630 | C9orf85 | 138241 | 1 | 18 | 21 | |
| GSE54993 | C9orf85 | 138241 | 4 | 1 | 65 | |
| GSE54994 | C9orf85 | 138241 | 4 | 13 | 36 | |
| GSE60625 | C9orf85 | 138241 | 0 | 0 | 11 | |
| GSE74703 | C9orf85 | 138241 | 5 | 4 | 27 | |
| GSE74704 | C9orf85 | 138241 | 3 | 8 | 9 | |
| TCGA | C9orf85 | 138241 | 19 | 27 | 50 |
Total number of gains: 60; Total number of losses: 112; Total Number of normals: 316.
Somatic mutations of C9orf85:
Generating mutation plots.
Highly correlated genes for C9orf85:
Showing top 20/327 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C9orf85 | SNRNP35 | 0.816746 | 3 | 0 | 3 |
| C9orf85 | UNK | 0.787299 | 3 | 0 | 3 |
| C9orf85 | MBD1 | 0.781581 | 3 | 0 | 3 |
| C9orf85 | ZMYM2 | 0.765394 | 3 | 0 | 3 |
| C9orf85 | STAM2 | 0.760858 | 3 | 0 | 3 |
| C9orf85 | PEX14 | 0.759761 | 3 | 0 | 3 |
| C9orf85 | USP25 | 0.742426 | 3 | 0 | 3 |
| C9orf85 | BBIP1 | 0.7329 | 4 | 0 | 4 |
| C9orf85 | CYP1A2 | 0.731218 | 3 | 0 | 3 |
| C9orf85 | PDCD7 | 0.721802 | 3 | 0 | 3 |
| C9orf85 | RRAGC | 0.71875 | 4 | 0 | 3 |
| C9orf85 | ESYT2 | 0.715179 | 4 | 0 | 3 |
| C9orf85 | RHOT1 | 0.713634 | 3 | 0 | 3 |
| C9orf85 | AGPAT4 | 0.710939 | 3 | 0 | 3 |
| C9orf85 | PCM1 | 0.7104 | 3 | 0 | 3 |
| C9orf85 | NHLH2 | 0.706748 | 3 | 0 | 3 |
| C9orf85 | KCMF1 | 0.70611 | 4 | 0 | 3 |
| C9orf85 | SLC35D2 | 0.705882 | 4 | 0 | 4 |
| C9orf85 | NCKAP1 | 0.700558 | 3 | 0 | 3 |
| C9orf85 | TBC1D20 | 0.690674 | 5 | 0 | 4 |
For details and further investigation, click here
