| Full name: calumenin | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 7q32.1 | ||
| Entrez ID: 813 | HGNC ID: HGNC:1458 | Ensembl Gene: ENSG00000128595 | OMIM ID: 603420 |
| Drug and gene relationship at DGIdb | |||
Expression of CALU:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CALU | 813 | 200757_s_at | 0.4299 | 0.4883 | |
| GSE20347 | CALU | 813 | 200757_s_at | 1.0963 | 0.0000 | |
| GSE23400 | CALU | 813 | 200757_s_at | 0.7008 | 0.0000 | |
| GSE26886 | CALU | 813 | 200757_s_at | -0.2262 | 0.2473 | |
| GSE29001 | CALU | 813 | 200757_s_at | 0.9210 | 0.0008 | |
| GSE38129 | CALU | 813 | 200757_s_at | 0.9259 | 0.0006 | |
| GSE45670 | CALU | 813 | 200757_s_at | 0.3904 | 0.1715 | |
| GSE53622 | CALU | 813 | 30615 | 1.4343 | 0.0000 | |
| GSE53624 | CALU | 813 | 30615 | 1.5257 | 0.0000 | |
| GSE63941 | CALU | 813 | 200757_s_at | -3.0014 | 0.0002 | |
| GSE77861 | CALU | 813 | 200757_s_at | 0.8461 | 0.0008 | |
| GSE97050 | CALU | 813 | A_23_P122815 | 0.6221 | 0.1173 | |
| SRP007169 | CALU | 813 | RNAseq | 2.6484 | 0.0000 | |
| SRP008496 | CALU | 813 | RNAseq | 3.0381 | 0.0000 | |
| SRP064894 | CALU | 813 | RNAseq | 1.3873 | 0.0000 | |
| SRP133303 | CALU | 813 | RNAseq | 1.5450 | 0.0000 | |
| SRP159526 | CALU | 813 | RNAseq | 0.9816 | 0.0000 | |
| SRP193095 | CALU | 813 | RNAseq | 1.3533 | 0.0000 | |
| TCGA | CALU | 813 | RNAseq | 0.0516 | 0.3746 |
Upregulated datasets: 8; Downregulated datasets: 1.
Survival by CALU expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CALU:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CALU | 813 | 8 | 1 | 21 | |
| GSE20123 | CALU | 813 | 8 | 1 | 21 | |
| GSE43470 | CALU | 813 | 2 | 3 | 38 | |
| GSE46452 | CALU | 813 | 7 | 2 | 50 | |
| GSE47630 | CALU | 813 | 7 | 4 | 29 | |
| GSE54993 | CALU | 813 | 3 | 5 | 62 | |
| GSE54994 | CALU | 813 | 8 | 7 | 38 | |
| GSE60625 | CALU | 813 | 0 | 0 | 11 | |
| GSE74703 | CALU | 813 | 2 | 3 | 31 | |
| GSE74704 | CALU | 813 | 4 | 1 | 15 | |
| TCGA | CALU | 813 | 28 | 22 | 46 |
Total number of gains: 77; Total number of losses: 49; Total Number of normals: 362.
Somatic mutations of CALU:
Generating mutation plots.
Highly correlated genes for CALU:
Showing top 20/1451 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CALU | SPARC | 0.835661 | 12 | 0 | 12 |
| CALU | TMEM263 | 0.824411 | 6 | 0 | 6 |
| CALU | VCAN | 0.818526 | 12 | 0 | 12 |
| CALU | FNDC1 | 0.813925 | 7 | 0 | 7 |
| CALU | COL4A1 | 0.81347 | 12 | 0 | 12 |
| CALU | GNG10 | 0.812105 | 3 | 0 | 3 |
| CALU | MMD | 0.795027 | 12 | 0 | 12 |
| CALU | CHN1 | 0.786827 | 12 | 0 | 12 |
| CALU | COL6A3 | 0.782377 | 12 | 0 | 12 |
| CALU | SULF1 | 0.781879 | 12 | 0 | 12 |
| CALU | COL4A2 | 0.78045 | 12 | 0 | 11 |
| CALU | PXDN | 0.780205 | 12 | 0 | 12 |
| CALU | COL1A2 | 0.776747 | 12 | 0 | 12 |
| CALU | COL12A1 | 0.775829 | 8 | 0 | 8 |
| CALU | PLOD3 | 0.77119 | 11 | 0 | 11 |
| CALU | NXN | 0.769804 | 3 | 0 | 3 |
| CALU | CDH11 | 0.769564 | 12 | 0 | 12 |
| CALU | INHBA | 0.767115 | 11 | 0 | 11 |
| CALU | FAP | 0.766436 | 10 | 0 | 10 |
| CALU | COL5A2 | 0.766299 | 12 | 0 | 12 |
For details and further investigation, click here
