TTC13

 

Full name: tetratricopeptide repeat domain 13 Alias Symbol: FLJ22584
Type: protein-coding gene Cytoband: 1q42.2
Entrez ID: 79573 HGNC ID: HGNC:26204 Ensembl Gene: ENSG00000143643 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TTC13:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TTC13 79573 219481_at 0.8924 0.0250
GSE20347 TTC13 79573 219481_at 0.5876 0.0002
GSE23400 TTC13 79573 219481_at 0.3037 0.0000
GSE26886 TTC13 79573 219481_at 0.2595 0.4188
GSE29001 TTC13 79573 219481_at 0.7839 0.0060
GSE38129 TTC13 79573 219481_at 0.5777 0.0000
GSE45670 TTC13 79573 219481_at 0.5846 0.0003
GSE53622 TTC13 79573 98685 0.4936 0.0000
GSE53624 TTC13 79573 98685 0.7194 0.0000
GSE63941 TTC13 79573 219481_at -0.3484 0.4817
GSE77861 TTC13 79573 219481_at 0.5127 0.0321
GSE97050 TTC13 79573 A_23_P103864 0.5150 0.1581
SRP007169 TTC13 79573 RNAseq 0.2973 0.4936
SRP008496 TTC13 79573 RNAseq 0.4422 0.1322
SRP064894 TTC13 79573 RNAseq 0.4183 0.0042
SRP133303 TTC13 79573 RNAseq 0.6028 0.0102
SRP159526 TTC13 79573 RNAseq 0.6075 0.1286
SRP193095 TTC13 79573 RNAseq 0.2002 0.1983
SRP219564 TTC13 79573 RNAseq 0.6730 0.1225
TCGA TTC13 79573 RNAseq -0.0823 0.1535

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by TTC13 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of TTC13:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TTC13 79573 11 0 19
GSE20123 TTC13 79573 11 0 19
GSE43470 TTC13 79573 8 1 34
GSE46452 TTC13 79573 4 2 53
GSE47630 TTC13 79573 15 0 25
GSE54993 TTC13 79573 0 6 64
GSE54994 TTC13 79573 17 0 36
GSE60625 TTC13 79573 0 0 11
GSE74703 TTC13 79573 8 1 27
GSE74704 TTC13 79573 5 0 15
TCGA TTC13 79573 45 3 48

Total number of gains: 124; Total number of losses: 13; Total Number of normals: 351.  

 

Somatic mutations of TTC13:

 

Generating mutation plots.

 

Highly correlated genes for TTC13:

 

Showing top 20/1245 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TTC13STIM20.747178404
TTC13CAPN120.744234303
TTC13UBE2T0.741926606
TTC13SPAG50.731218909
TTC13MTBP0.719605505
TTC13DTL0.7057710010
TTC13UBQLN40.699837505
TTC13SNAP470.698777303
TTC13NEK20.69843910010
TTC13NVL0.69684411010
TTC13GMNN0.694410010
TTC13CDCA20.690754404
TTC13BUB10.683863707
TTC13MCM60.6827310010
TTC13KIF140.67878910010
TTC13NUF20.678788706
TTC13TIMELESS0.6787411008
TTC13CENPF0.67860210010
TTC13TMEM970.67755310010
TTC13EME10.676707404

For details and further investigation, click here