DKC1

 

Full name: dyskerin pseudouridine synthase 1 Alias Symbol: XAP101|dyskerin|NAP57|NOLA4|Cbf5
Type: protein-coding gene Cytoband: Xq28
Entrez ID: 1736 HGNC ID: HGNC:2890 Ensembl Gene: ENSG00000130826 OMIM ID: 300126
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of DKC1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 DKC1 1736 34518 0.7982 0.0000
GSE53624 DKC1 1736 34518 0.9675 0.0000
GSE97050 DKC1 1736 A_23_P137143 0.5867 0.1930
SRP007169 DKC1 1736 RNAseq 1.5982 0.0007
SRP008496 DKC1 1736 RNAseq 1.6635 0.0000
SRP064894 DKC1 1736 RNAseq 0.7335 0.0012
SRP133303 DKC1 1736 RNAseq 1.1522 0.0000
SRP159526 DKC1 1736 RNAseq 0.8501 0.0023
SRP193095 DKC1 1736 RNAseq 0.5563 0.0003
SRP219564 DKC1 1736 RNAseq 0.9151 0.0578
TCGA DKC1 1736 RNAseq 0.3678 0.0000

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by DKC1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DKC1:

 

No record found for this gene.


 

Somatic mutations of DKC1:

 

Generating mutation plots.

 

Highly correlated genes for DKC1:

 

Showing top 20/693 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DKC1BLM0.823618303
DKC1BIRC50.821495303
DKC1TTK0.813786303
DKC1DDX39A0.811564303
DKC1NOP20.806874303
DKC1GINS10.805936303
DKC1UBE2C0.803963303
DKC1RUVBL10.80242303
DKC1CENPN0.801192303
DKC1NLN0.798765303
DKC1DCAF130.792192303
DKC1HJURP0.791885303
DKC1CEP550.789929303
DKC1SKA10.789494303
DKC1CCNF0.788333303
DKC1CDT10.786305303
DKC1TOP1MT0.784535303
DKC1NEK20.784285303
DKC1CCNA20.783404303
DKC1CEP850.782971303

For details and further investigation, click here