CDC42EP5

 

Full name: CDC42 effector protein 5 Alias Symbol: CEP5|Borg3
Type: protein-coding gene Cytoband: 19q13.42
Entrez ID: 148170 HGNC ID: HGNC:17408 Ensembl Gene: ENSG00000167617 OMIM ID: 609171
Drug and gene relationship at DGIdb

 

Expression of CDC42EP5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CDC42EP5 148170 227850_x_at -0.6003 0.3210
GSE26886 CDC42EP5 148170 227850_x_at -1.6511 0.0052
GSE45670 CDC42EP5 148170 227850_x_at -0.5733 0.1553
GSE53622 CDC42EP5 148170 54620 0.0034 0.9488
GSE53624 CDC42EP5 148170 54620 -0.0058 0.9272
GSE63941 CDC42EP5 148170 227850_x_at -2.3104 0.0600
GSE77861 CDC42EP5 148170 227850_x_at -1.5617 0.0264
GSE97050 CDC42EP5 148170 A_33_P3342235 0.2881 0.2429
SRP007169 CDC42EP5 148170 RNAseq -2.2246 0.0000
SRP064894 CDC42EP5 148170 RNAseq -1.0091 0.0306
SRP133303 CDC42EP5 148170 RNAseq -1.1927 0.0007
SRP159526 CDC42EP5 148170 RNAseq -1.2079 0.0000
SRP219564 CDC42EP5 148170 RNAseq -0.2372 0.6237
TCGA CDC42EP5 148170 RNAseq -0.3946 0.0030

Upregulated datasets: 0; Downregulated datasets: 6.  


 

Survival by CDC42EP5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CDC42EP5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CDC42EP5 148170 3 4 23
GSE20123 CDC42EP5 148170 3 3 24
GSE43470 CDC42EP5 148170 2 11 30
GSE46452 CDC42EP5 148170 45 1 13
GSE47630 CDC42EP5 148170 8 6 26
GSE54993 CDC42EP5 148170 17 4 49
GSE54994 CDC42EP5 148170 4 13 36
GSE60625 CDC42EP5 148170 9 0 2
GSE74703 CDC42EP5 148170 2 7 27
GSE74704 CDC42EP5 148170 3 1 16
TCGA CDC42EP5 148170 19 14 63

Total number of gains: 115; Total number of losses: 64; Total Number of normals: 309.  


 

Somatic mutations of CDC42EP5:

 

Generating mutation plots.

 

Highly correlated genes for CDC42EP5:

 

Showing top 20/354 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CDC42EP5AASS0.735957303
CDC42EP5PLAA0.716962303
CDC42EP5MAP40.714398403
CDC42EP5RNF1250.700571303
CDC42EP5ADAMTSL50.693508403
CDC42EP5UTS2R0.69346303
CDC42EP5ZNF6810.688055303
CDC42EP5ENTPD20.684962303
CDC42EP5GBP20.684888303
CDC42EP5TJP30.684098404
CDC42EP5NTN10.682404404
CDC42EP5PLEKHG50.678042303
CDC42EP5MAP3K80.675117303
CDC42EP5SLC11A10.672315303
CDC42EP5CAPN30.670353303
CDC42EP5PRSS360.667277303
CDC42EP5CALY0.665614303
CDC42EP5DUSP220.661651403
CDC42EP5FAM3B0.656767403
CDC42EP5COG30.654563404

For details and further investigation, click here