| Full name: cysteine and serine rich nuclear protein 1 | Alias Symbol: URAX1|DKFZp566F164|FAM130B|TAIP-3 | ||
| Type: protein-coding gene | Cytoband: 3p22.2 | ||
| Entrez ID: 64651 | HGNC ID: HGNC:14300 | Ensembl Gene: ENSG00000144655 | OMIM ID: 606458 |
| Drug and gene relationship at DGIdb | |||
Expression of CSRNP1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CSRNP1 | 64651 | 225557_at | -0.7627 | 0.4516 | |
| GSE26886 | CSRNP1 | 64651 | 225557_at | -0.7854 | 0.0076 | |
| GSE45670 | CSRNP1 | 64651 | 225557_at | -0.7634 | 0.0002 | |
| GSE53622 | CSRNP1 | 64651 | 119647 | -1.1261 | 0.0000 | |
| GSE53624 | CSRNP1 | 64651 | 29151 | -1.1233 | 0.0000 | |
| GSE63941 | CSRNP1 | 64651 | 225557_at | -0.7731 | 0.3490 | |
| GSE77861 | CSRNP1 | 64651 | 225557_at | -0.7412 | 0.0393 | |
| GSE97050 | CSRNP1 | 64651 | A_23_P121011 | -0.9293 | 0.2272 | |
| SRP007169 | CSRNP1 | 64651 | RNAseq | -2.6040 | 0.0000 | |
| SRP008496 | CSRNP1 | 64651 | RNAseq | -2.0987 | 0.0000 | |
| SRP064894 | CSRNP1 | 64651 | RNAseq | -1.1127 | 0.0007 | |
| SRP133303 | CSRNP1 | 64651 | RNAseq | -0.7417 | 0.0044 | |
| SRP159526 | CSRNP1 | 64651 | RNAseq | -1.5341 | 0.0006 | |
| SRP193095 | CSRNP1 | 64651 | RNAseq | -0.4224 | 0.0466 | |
| SRP219564 | CSRNP1 | 64651 | RNAseq | -0.8495 | 0.2703 | |
| TCGA | CSRNP1 | 64651 | RNAseq | -0.6025 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 6.
Survival by CSRNP1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CSRNP1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CSRNP1 | 64651 | 0 | 19 | 11 | |
| GSE20123 | CSRNP1 | 64651 | 0 | 19 | 11 | |
| GSE43470 | CSRNP1 | 64651 | 0 | 20 | 23 | |
| GSE46452 | CSRNP1 | 64651 | 2 | 17 | 40 | |
| GSE47630 | CSRNP1 | 64651 | 1 | 25 | 14 | |
| GSE54993 | CSRNP1 | 64651 | 7 | 2 | 61 | |
| GSE54994 | CSRNP1 | 64651 | 1 | 33 | 19 | |
| GSE60625 | CSRNP1 | 64651 | 5 | 0 | 6 | |
| GSE74703 | CSRNP1 | 64651 | 0 | 16 | 20 | |
| GSE74704 | CSRNP1 | 64651 | 0 | 13 | 7 | |
| TCGA | CSRNP1 | 64651 | 2 | 70 | 24 |
Total number of gains: 18; Total number of losses: 234; Total Number of normals: 236.
Somatic mutations of CSRNP1:
Generating mutation plots.
Highly correlated genes for CSRNP1:
Showing top 20/506 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CSRNP1 | GIPC3 | 0.754811 | 3 | 0 | 3 |
| CSRNP1 | GADD45B | 0.753235 | 8 | 0 | 8 |
| CSRNP1 | ZFP36 | 0.742021 | 6 | 0 | 5 |
| CSRNP1 | ATF3 | 0.737286 | 5 | 0 | 5 |
| CSRNP1 | DUSP1 | 0.71783 | 7 | 0 | 7 |
| CSRNP1 | ANKS1B | 0.709782 | 4 | 0 | 4 |
| CSRNP1 | JUND | 0.705677 | 6 | 0 | 6 |
| CSRNP1 | KLF6 | 0.699903 | 8 | 0 | 7 |
| CSRNP1 | ARHGAP33 | 0.698929 | 3 | 0 | 3 |
| CSRNP1 | SMR3B | 0.698649 | 3 | 0 | 3 |
| CSRNP1 | RBFOX3 | 0.694817 | 3 | 0 | 3 |
| CSRNP1 | CYP21A2 | 0.683849 | 3 | 0 | 3 |
| CSRNP1 | PRDM8 | 0.682023 | 3 | 0 | 3 |
| CSRNP1 | SOX10 | 0.681624 | 4 | 0 | 3 |
| CSRNP1 | MAFF | 0.67885 | 8 | 0 | 8 |
| CSRNP1 | CADM2 | 0.676516 | 4 | 0 | 4 |
| CSRNP1 | TOB1 | 0.673255 | 6 | 0 | 6 |
| CSRNP1 | C9orf47 | 0.673108 | 4 | 0 | 3 |
| CSRNP1 | ZNF385D | 0.669029 | 5 | 0 | 4 |
| CSRNP1 | SORCS1 | 0.667026 | 4 | 0 | 4 |
For details and further investigation, click here
