EPHB4

 

Full name: EPH receptor B4 Alias Symbol: Tyro11
Type: protein-coding gene Cytoband: 7q22.1
Entrez ID: 2050 HGNC ID: HGNC:3395 Ensembl Gene: ENSG00000196411 OMIM ID: 600011
Drug and gene relationship at DGIdb

 

EPHB4 involved pathways:

KEGG pathway Description View
hsa04360Axon guidance

 

Expression of EPHB4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EPHB4 2050 202894_at 0.8750 0.0143
GSE20347 EPHB4 2050 202894_at 0.9710 0.0000
GSE23400 EPHB4 2050 202894_at 0.7400 0.0000
GSE26886 EPHB4 2050 202894_at 1.5858 0.0000
GSE29001 EPHB4 2050 202894_at 1.0676 0.0079
GSE38129 EPHB4 2050 202894_at 0.8234 0.0000
GSE45670 EPHB4 2050 202894_at 0.5743 0.0046
GSE53622 EPHB4 2050 109182 1.0088 0.0000
GSE53624 EPHB4 2050 109182 0.6620 0.0000
GSE63941 EPHB4 2050 202894_at -0.1934 0.6451
GSE77861 EPHB4 2050 202894_at 0.6860 0.0126
GSE97050 EPHB4 2050 A_33_P3216532 0.5781 0.1983
SRP007169 EPHB4 2050 RNAseq 1.0580 0.0030
SRP008496 EPHB4 2050 RNAseq 1.3626 0.0000
SRP064894 EPHB4 2050 RNAseq 1.0517 0.0000
SRP133303 EPHB4 2050 RNAseq 0.7638 0.0070
SRP159526 EPHB4 2050 RNAseq 1.0882 0.0042
SRP193095 EPHB4 2050 RNAseq 1.2604 0.0000
SRP219564 EPHB4 2050 RNAseq 0.8997 0.0332
TCGA EPHB4 2050 RNAseq 0.1955 0.0064

Upregulated datasets: 8; Downregulated datasets: 0.  


 

Survival by EPHB4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EPHB4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EPHB4 2050 13 0 17
GSE20123 EPHB4 2050 13 0 17
GSE43470 EPHB4 2050 7 2 34
GSE46452 EPHB4 2050 11 1 47
GSE47630 EPHB4 2050 7 3 30
GSE54993 EPHB4 2050 1 9 60
GSE54994 EPHB4 2050 16 3 34
GSE60625 EPHB4 2050 0 0 11
GSE74703 EPHB4 2050 7 1 28
GSE74704 EPHB4 2050 9 0 11
TCGA EPHB4 2050 53 6 37

Total number of gains: 137; Total number of losses: 25; Total Number of normals: 326.  


 

Somatic mutations of EPHB4:

 

Generating mutation plots.

 

Highly correlated genes for EPHB4:

 

Showing top 20/1904 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EPHB4EME10.782465505
EPHB4POU5F20.775353303
EPHB4MYBL20.75588311011
EPHB4HCFC1R10.755813404
EPHB4TMEM132A0.734291909
EPHB4CDCA20.733483505
EPHB4MCM60.731293909
EPHB4MYO100.729059707
EPHB4UBE2T0.725903706
EPHB4SCYL10.722699404
EPHB4PPP1R350.720805706
EPHB4APMAP0.718389909
EPHB4UBE2C0.71365211011
EPHB4CDC25B0.71338111010
EPHB4PLOD30.71068512010
EPHB4DNMT10.71017111010
EPHB4ARPC1B0.7101261009
EPHB4MRPL140.709396403
EPHB4POP70.70808613012
EPHB4SDC30.707411404

For details and further investigation, click here