| Full name: family with sequence similarity 78 member A | Alias Symbol: FLJ00024 | ||
| Type: protein-coding gene | Cytoband: 9q34.13 | ||
| Entrez ID: 286336 | HGNC ID: HGNC:25465 | Ensembl Gene: ENSG00000126882 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of FAM78A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM78A | 286336 | 227002_at | 0.4141 | 0.5334 | |
| GSE26886 | FAM78A | 286336 | 227002_at | -0.0018 | 0.9928 | |
| GSE45670 | FAM78A | 286336 | 227002_at | -0.0602 | 0.7501 | |
| GSE63941 | FAM78A | 286336 | 227002_at | 0.5445 | 0.2629 | |
| GSE77861 | FAM78A | 286336 | 227002_at | -0.1362 | 0.4596 | |
| GSE97050 | FAM78A | 286336 | A_23_P314250 | 0.3659 | 0.1675 | |
| SRP007169 | FAM78A | 286336 | RNAseq | 1.6927 | 0.0716 | |
| SRP064894 | FAM78A | 286336 | RNAseq | 0.9337 | 0.0017 | |
| SRP133303 | FAM78A | 286336 | RNAseq | -0.0900 | 0.6271 | |
| SRP159526 | FAM78A | 286336 | RNAseq | -0.6703 | 0.3343 | |
| SRP193095 | FAM78A | 286336 | RNAseq | 0.2796 | 0.2005 | |
| SRP219564 | FAM78A | 286336 | RNAseq | 0.6781 | 0.0451 | |
| TCGA | FAM78A | 286336 | RNAseq | 0.0866 | 0.5285 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by FAM78A expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of FAM78A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM78A | 286336 | 6 | 9 | 15 | |
| GSE20123 | FAM78A | 286336 | 6 | 9 | 15 | |
| GSE43470 | FAM78A | 286336 | 5 | 7 | 31 | |
| GSE46452 | FAM78A | 286336 | 6 | 13 | 40 | |
| GSE47630 | FAM78A | 286336 | 3 | 16 | 21 | |
| GSE54993 | FAM78A | 286336 | 3 | 3 | 64 | |
| GSE54994 | FAM78A | 286336 | 12 | 9 | 32 | |
| GSE60625 | FAM78A | 286336 | 0 | 0 | 11 | |
| GSE74703 | FAM78A | 286336 | 5 | 5 | 26 | |
| GSE74704 | FAM78A | 286336 | 3 | 7 | 10 | |
| TCGA | FAM78A | 286336 | 27 | 26 | 43 |
Total number of gains: 76; Total number of losses: 104; Total Number of normals: 308.
Somatic mutations of FAM78A:
Generating mutation plots.
Highly correlated genes for FAM78A:
Showing top 20/137 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM78A | TRAT1 | 0.782039 | 3 | 0 | 3 |
| FAM78A | CYTIP | 0.755981 | 3 | 0 | 3 |
| FAM78A | SPOCK2 | 0.746802 | 4 | 0 | 4 |
| FAM78A | RNASE6 | 0.745528 | 3 | 0 | 3 |
| FAM78A | LY86 | 0.744718 | 3 | 0 | 3 |
| FAM78A | AKNA | 0.734478 | 4 | 0 | 3 |
| FAM78A | SNX20 | 0.725003 | 4 | 0 | 3 |
| FAM78A | SUSD3 | 0.715581 | 3 | 0 | 3 |
| FAM78A | BCL2L11 | 0.715198 | 3 | 0 | 3 |
| FAM78A | IL2RB | 0.706611 | 4 | 0 | 4 |
| FAM78A | TBC1D10C | 0.704038 | 5 | 0 | 4 |
| FAM78A | ARHGAP25 | 0.702359 | 3 | 0 | 3 |
| FAM78A | CD48 | 0.696974 | 5 | 0 | 4 |
| FAM78A | ITGA4 | 0.696058 | 3 | 0 | 3 |
| FAM78A | ACSF3 | 0.695569 | 3 | 0 | 3 |
| FAM78A | CD300C | 0.694606 | 3 | 0 | 3 |
| FAM78A | LST1 | 0.693575 | 4 | 0 | 4 |
| FAM78A | IL10RA | 0.686565 | 4 | 0 | 3 |
| FAM78A | ABI3 | 0.683207 | 5 | 0 | 4 |
| FAM78A | TNFAIP8L2 | 0.682688 | 3 | 0 | 3 |
For details and further investigation, click here
