GALNT10

 

Full name: polypeptide N-acetylgalactosaminyltransferase 10 Alias Symbol: GalNAc-T10
Type: protein-coding gene Cytoband: 5q33.2
Entrez ID: 55568 HGNC ID: HGNC:19873 Ensembl Gene: ENSG00000164574 OMIM ID: 608043
Drug and gene relationship at DGIdb

 

Expression of GALNT10:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GALNT10 55568 212256_at 0.7634 0.1241
GSE20347 GALNT10 55568 212256_at 0.6202 0.0014
GSE23400 GALNT10 55568 212256_at 0.4674 0.0000
GSE26886 GALNT10 55568 212256_at 1.5836 0.0000
GSE29001 GALNT10 55568 212256_at 1.0174 0.0091
GSE38129 GALNT10 55568 212256_at 0.4422 0.1782
GSE45670 GALNT10 55568 212256_at 0.2836 0.4158
GSE53622 GALNT10 55568 112067 0.7738 0.0000
GSE53624 GALNT10 55568 112067 1.3616 0.0000
GSE63941 GALNT10 55568 207357_s_at -2.1776 0.0129
GSE97050 GALNT10 55568 A_33_P3703501 0.8707 0.0830
SRP007169 GALNT10 55568 RNAseq 1.6810 0.0000
SRP008496 GALNT10 55568 RNAseq 1.5002 0.0000
SRP064894 GALNT10 55568 RNAseq 1.3793 0.0000
SRP133303 GALNT10 55568 RNAseq 1.2551 0.0000
SRP159526 GALNT10 55568 RNAseq 0.7343 0.0453
SRP193095 GALNT10 55568 RNAseq 0.0860 0.7843
SRP219564 GALNT10 55568 RNAseq 0.8898 0.1600
TCGA GALNT10 55568 RNAseq -0.4309 0.0000

Upregulated datasets: 7; Downregulated datasets: 1.  

 

Survival by GALNT10 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of GALNT10:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GALNT10 55568 0 12 18
GSE20123 GALNT10 55568 0 12 18
GSE43470 GALNT10 55568 2 10 31
GSE46452 GALNT10 55568 0 27 32
GSE47630 GALNT10 55568 0 20 20
GSE54993 GALNT10 55568 9 1 60
GSE54994 GALNT10 55568 1 16 36
GSE60625 GALNT10 55568 0 0 11
GSE74703 GALNT10 55568 2 8 26
GSE74704 GALNT10 55568 0 7 13
TCGA GALNT10 55568 7 36 53

Total number of gains: 21; Total number of losses: 149; Total Number of normals: 318.  

 

Somatic mutations of GALNT10:

 

Generating mutation plots.

 

Highly correlated genes for GALNT10:

 

Showing top 20/1434 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GALNT10PDIA50.774645303
GALNT10FAP0.762011909
GALNT10LRRC8C0.760825303
GALNT10COL5A10.75747611011
GALNT10FNDC3B0.746975909
GALNT10HTRA10.74676711011
GALNT10GPX80.742198707
GALNT10PLEKHG20.737451303
GALNT10CMTM30.737412707
GALNT10SH3PXD2B0.7345605
GALNT10RHOBTB10.73263711011
GALNT10ZNF4690.73052706
GALNT10NEK60.727893605
GALNT10TMEM132A0.726777404
GALNT10SPARC0.72674111011
GALNT10SLC39A130.726647706
GALNT10RAB340.726036303
GALNT10PSMG30.725579303
GALNT10LILRB20.724806606
GALNT10GLIS20.722566707

For details and further investigation, click here