LRRC8C

 

Full name: leucine rich repeat containing 8 VRAC subunit C Alias Symbol: AD158
Type: protein-coding gene Cytoband: 1p22.2
Entrez ID: 84230 HGNC ID: HGNC:25075 Ensembl Gene: ENSG00000171488 OMIM ID: 612889
Drug and gene relationship at DGIdb

 

Expression of LRRC8C:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 LRRC8C 84230 99549 0.7806 0.0000
GSE53624 LRRC8C 84230 99549 1.3608 0.0000
GSE97050 LRRC8C 84230 A_33_P3406030 0.8892 0.0608
SRP007169 LRRC8C 84230 RNAseq 2.5745 0.0000
SRP008496 LRRC8C 84230 RNAseq 2.7140 0.0000
SRP064894 LRRC8C 84230 RNAseq 1.2396 0.0000
SRP133303 LRRC8C 84230 RNAseq 0.9839 0.0000
SRP159526 LRRC8C 84230 RNAseq 0.4103 0.1984
SRP193095 LRRC8C 84230 RNAseq 1.5189 0.0000
SRP219564 LRRC8C 84230 RNAseq 0.8131 0.1272
TCGA LRRC8C 84230 RNAseq 0.1902 0.0332

Upregulated datasets: 5; Downregulated datasets: 0.  


 

Survival by LRRC8C expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LRRC8C:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LRRC8C 84230 0 8 22
GSE20123 LRRC8C 84230 0 8 22
GSE43470 LRRC8C 84230 2 3 38
GSE46452 LRRC8C 84230 1 1 57
GSE47630 LRRC8C 84230 8 5 27
GSE54993 LRRC8C 84230 0 1 69
GSE54994 LRRC8C 84230 6 2 45
GSE60625 LRRC8C 84230 0 0 11
GSE74703 LRRC8C 84230 1 3 32
GSE74704 LRRC8C 84230 0 5 15
TCGA LRRC8C 84230 6 22 68

Total number of gains: 24; Total number of losses: 58; Total Number of normals: 406.  


 

Somatic mutations of LRRC8C:

 

Generating mutation plots.

 

Highly correlated genes for LRRC8C:

 

Showing top 20/561 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LRRC8CGNA120.822214303
LRRC8CTNFAIP60.810497303
LRRC8CCD140.80579303
LRRC8CYWHAH0.802397303
LRRC8CLPCAT10.802025303
LRRC8CFMNL30.799782303
LRRC8CSH3PXD2B0.797296303
LRRC8CRAB310.78831303
LRRC8CACVR10.786351303
LRRC8CDRAM10.784505303
LRRC8CPRR160.784386303
LRRC8CPRSS230.783763303
LRRC8CRGS30.783333303
LRRC8CAHR0.783291303
LRRC8CZNF4690.783057303
LRRC8CGPX80.782349303
LRRC8CCTSK0.780207303
LRRC8CTLR20.780081303
LRRC8CAMIGO20.779198303
LRRC8CMYO5A0.779118303

For details and further investigation, click here