TTC9C

 

Full name: tetratricopeptide repeat domain 9C Alias Symbol: MGC29649
Type: protein-coding gene Cytoband: 11q12.3
Entrez ID: 283237 HGNC ID: HGNC:28432 Ensembl Gene: ENSG00000162222 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TTC9C:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TTC9C 283237 226175_at 0.2752 0.2670
GSE26886 TTC9C 283237 226175_at 0.7057 0.0001
GSE45670 TTC9C 283237 226175_at 0.4650 0.0010
GSE53622 TTC9C 283237 142131 0.5235 0.0000
GSE53624 TTC9C 283237 142131 0.7355 0.0000
GSE63941 TTC9C 283237 226175_at 0.0623 0.9166
GSE77861 TTC9C 283237 226175_at 0.0580 0.7778
GSE97050 TTC9C 283237 A_23_P24751 0.5557 0.2151
SRP007169 TTC9C 283237 RNAseq 0.3761 0.4073
SRP008496 TTC9C 283237 RNAseq 0.2985 0.3491
SRP064894 TTC9C 283237 RNAseq 0.3918 0.0009
SRP133303 TTC9C 283237 RNAseq 0.1707 0.2652
SRP159526 TTC9C 283237 RNAseq 0.2541 0.2297
SRP193095 TTC9C 283237 RNAseq 0.1237 0.2000
SRP219564 TTC9C 283237 RNAseq 0.3457 0.3296
TCGA TTC9C 283237 RNAseq 0.1447 0.0301

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by TTC9C expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of TTC9C:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TTC9C 283237 6 5 19
GSE20123 TTC9C 283237 6 5 19
GSE43470 TTC9C 283237 1 6 36
GSE46452 TTC9C 283237 8 4 47
GSE47630 TTC9C 283237 3 7 30
GSE54993 TTC9C 283237 3 0 67
GSE54994 TTC9C 283237 4 5 44
GSE60625 TTC9C 283237 0 3 8
GSE74703 TTC9C 283237 1 3 32
GSE74704 TTC9C 283237 4 3 13
TCGA TTC9C 283237 12 11 73

Total number of gains: 48; Total number of losses: 52; Total Number of normals: 388.  

 

Somatic mutations of TTC9C:

 

Generating mutation plots.

 

Highly correlated genes for TTC9C:

 

Showing top 20/837 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TTC9CBUB1B0.72993303
TTC9CTAF1A0.716747505
TTC9CKIF18A0.715622505
TTC9CMCM20.705538606
TTC9CKIF2C0.702938606
TTC9CCKS1B0.701452606
TTC9CLRRC8D0.699429606
TTC9CSAC3D10.695029606
TTC9CCDK10.688688505
TTC9CHOXC130.683471404
TTC9CERCC6L0.681453404
TTC9CXPO10.681073404
TTC9CUBE2T0.680457606
TTC9CTXNDC120.678945606
TTC9CRFC40.678579606
TTC9CMCM70.677642606
TTC9CMTFP10.677001404
TTC9CDDIAS0.675503404
TTC9CWDHD10.675493505
TTC9CFOXM10.674342606

For details and further investigation, click here